RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 IFT122Q9HBG6 1241 aa12.21□□□□□ -0.45
GCN1-202ENST00000547263 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.46
GCN1-202ENST00000547263 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.46
GCN1-202ENST00000547263 C9IYK1 514 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 GPR182O15218 404 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 ASAP2O43150 1006 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 STX6O43752 255 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 MGEA5O60502 916 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 RPS6KA5O75582 802 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 MYOGP15173 224 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 ARL2P36404 184 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 TAP1Q03518 808 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 EMC2Q15006 297 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 ERMNQ8TAM6 284 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 SLC7A3Q8WY07 619 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 NACC1Q96RE7 527 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 NFKBIZQ9BYH8 718 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 NKX2-4Q9H2Z4 354 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 ZSCAN16Q9H4T2 348 aaPredicted RBP12.2□□□□□ -0.46
GCN1-202ENST00000547263 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 RGS18Q9NS28 235 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
GCN1-202ENST00000547263 LRWD1Q9UFC0 647 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 MSRAQ9UJ68 235 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 ST3GAL5Q9UNP4 418 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 AKT3Q9Y243 479 aa12.2□□□□□ -0.46
GCN1-202ENST00000547263 COL4A4P53420 1690 aaPredicted RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 KIAA1671Q9BY89 1806 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 LCHNA4D1U4 455 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 VPS37CA5D8V6 355 aaPredicted RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 CA3P07451 260 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 POU3F3P20264 500 aaPredicted RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 DNM2P50570 870 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 POLGP54098 1239 aaPredicted RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 PAK2Q13177 524 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 TMCO2Q7Z6W1 182 aaPredicted RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 PIGOQ8TEQ8 1089 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 AK8Q96MA6 479 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 MTRQ99707 1265 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 ELAC1Q9H777 363 aaKnown RBP12.19□□□□□ -0.46
GCN1-202ENST00000547263 C1orf112Q9NSG2 853 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 STXBP5LQ9Y2K9 1186 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 INSL6Q9Y581 213 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 COL4A3BPQ9Y5P4 624 aa12.19□□□□□ -0.46
GCN1-202ENST00000547263 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 A0A087WZ62 844 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 LINC01553A4QN01 128 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 TLL1O43897 1013 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 DGKIO75912 1065 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 CYP11B2P19099 503 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 SARSP49591 514 aaKnown RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 ERVK-21P61565 698 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
GCN1-202ENST00000547263 TMEM119Q4V9L6 283 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 KCNK18Q7Z418 384 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 SRGAP1Q7Z6B7 1085 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 NPAS4Q8IUM7 802 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 MYOCDQ8IZQ8 938 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 CDX2Q99626 313 aaPredicted RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 FDXACB1Q9BRP7 624 aaPredicted RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 GCOM2Q9BZD3 368 aaPredicted RBP12.18□□□□□ -0.46
GCN1-202ENST00000547263 SLC28A3Q9HAS3 691 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 ATP6V0A4Q9HBG4 840 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
GCN1-202ENST00000547263 EYA4O95677 639 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 GLRA2P23416 452 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 NASPP49321 788 aaPredicted RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 PTENP60484 403 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 GRIN1Q05586 938 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 GRB10Q13322 594 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 FAM173BQ6P4H8 233 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 SLC24A5Q71RS6 500 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 ZNF598Q86UK7 904 aaKnown RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 RHPN2Q8IUC4 686 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 SNX29Q8TEQ0 813 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 LRRC15Q8TF66 581 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 KCNN1Q92952 543 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 CLP1Q92989 425 aaKnown RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 TMEM143Q96AN5 459 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 INO80BQ9C086 356 aaPredicted RBP12.17□□□□□ -0.46
GCN1-202ENST00000547263 CCSER1Q9C0I3 900 aa12.17□□□□□ -0.46
GCN1-202ENST00000547263 MINDY3Q9H8M7 445 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms