RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 PSPNO60542 156 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 EFEMP2O95967 443 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 ASGR2P07307 311 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 MMEP08473 750 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 INHBBP09529 407 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 HSPA6P17066 643 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 GALK1P51570 392 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 ERVFC1P60507 584 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 UGT8Q16880 541 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 CCDC62Q6P9F0 684 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 ESPNLQ6ZVH7 1005 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 TRIM48Q8IWZ4 208 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 C7orf31Q8N865 590 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 HIPK4Q8NE63 616 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 MYLIPQ8WY64 445 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 KCNN1Q92952 543 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 AIFM3Q96NN9 605 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 SLC2A13Q96QE2 648 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 TUBGCP5Q96RT8 1024 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 ORAI2Q96SN7 254 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 NUP88Q99567 741 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 POFUT1Q9H488 388 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 C19orf44Q9H6X5 657 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 USP36Q9P275 1121 aaKnown RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 DDX20Q9UHI6 824 aaKnown RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 GPR160Q9UJ42 338 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 GPR45Q9Y5Y3 372 aa5.13□□□□□ -1.59
PTCD3-216ENST00000487043 TTBK1Q5TCY1 1321 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-216ENST00000487043 PCF11O94913 1555 aaKnown RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 TCRBV5S2A0A599 114 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 UBA6A0AVT1 1052 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ACOT7O00154 380 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ETV2O00321 342 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 AP1G1O43747 822 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 NUAK1O60285 661 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 LPLP06858 475 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 AGXTP21549 392 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 C5AR1P21730 350 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 TRHRP34981 398 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 MANFP55145 182 aaKnown RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 CTSWP56202 376 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 GRM3Q14832 879 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 RRP12Q5JTH9 1297 aaKnown RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 AMIGO3Q86WK7 504 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 NME9Q86XW9 330 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 PHYKPLQ8IUZ5 450 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 MIER2Q8N344 545 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 NETO2Q8NC67 525 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ARRDC4Q8NCT1 418 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ASB15Q8WXK1 588 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 FERMT2Q96AC1 680 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 GBP4Q96PP9 640 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 CD320Q9NPF0 282 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 NMRK2Q9NPI5 230 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 RAPGEFL1Q9UHV5 662 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 SMG5Q9UPR3 1016 aaKnown RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 FAM50BQ9Y247 325 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 PPP2R3BQ9Y5P8 575 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 COMMD10Q9Y6G5 202 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 FRMPD2Q68DX3 1309 aaPredicted RBP5.12□□□□□ -1.59
PTCD3-216ENST00000487043 TIAM1Q13009 1591 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
PTCD3-216ENST00000487043 PRSS38A1L453 326 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 PRAMEF22A3QJZ6 481 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 ELL2O00472 640 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 ERC2O15083 957 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 OFD1O75665 1012 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 NBPF7P0C2Y1 421 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 ARL4AP40617 200 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 BUD31P41223 144 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 MOGSQ13724 837 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 ZNF267Q14586 743 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 PAN2Q504Q3 1202 aaKnown RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 TIGD5Q53EQ6 642 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 PRAMEF18Q5VWM3 479 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 IL31Q6EBC2 164 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 TIGD7Q6NT04 549 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 SMC5Q8IY18 1101 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 PPM1NQ8N819 430 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 MYL10Q9BUA6 226 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 SARGQ9BW04 601 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 CSRNP2Q9H175 543 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 SLC12A5Q9H2X9 1139 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 DBR1Q9UK59 544 aaKnown RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 NUDT5Q9UKK9 219 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 CCDC18Q5T9S5 1454 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 PLB1Q6P1J6 1458 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 LRRC9Q6ZRR7 1453 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 EPRSP07814 1512 aaKnown RBP5.11□□□□□ -1.59
PTCD3-216ENST00000487043 ABCA8O94911 1581 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 HECW1Q76N89 1606 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 RAPGEF6Q8TEU7 1601 aa5.11□□□□□ -1.59
PTCD3-216ENST00000487043 F8W031 263 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 GOLGA6L22H0YM25 854 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 CTNND1O60716 968 aaKnown RBP5.1□□□□□ -1.59
PTCD3-216ENST00000487043 NDUFS2O75306 463 aa5.1□□□□□ -1.59
PTCD3-216ENST00000487043 EIF3JO75822 258 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms