RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ZDHHC14Q8IZN3 488 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 FGD4Q96M96 766 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 DDX50Q9BQ39 737 aaKnown RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 KIAA1683Q9H0B3 1180 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 METTL5Q9NRN9 209 aaKnown RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 CHCHD3Q9NX63 227 aaKnown RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 COL4A3BPQ9Y5P4 624 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 DUOX1Q9NRD9 1551 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 PFASO15067 1338 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 T-ENOLP0DO92 83 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 GNAT2P19087 354 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 CYP7A1P22680 504 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 LETM2Q2VYF4 491 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 KIAA1755Q5JYT7 1200 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 SPDYCQ5MJ68 293 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 DPY19L2P1Q6NXN4 242 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 RFWD3Q6PCD5 774 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 MARCH10Q8NA82 808 aaPredicted RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ZBTB38Q8NAP3 1195 aaPredicted RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 SPIRE2Q8WWL2 714 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ARHGEF2Q92974 986 aaKnown RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 SLC7A6OSQ96CW6 309 aaPredicted RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ERP27Q96DN0 273 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ZNF333Q96JL9 665 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ANKRD27Q96NW4 1050 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 TBC1D10AQ9BXI6 508 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 KCNK9Q9NPC2 374 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 SUCLA2Q9P2R7 463 aaPredicted RBP10.63□□□□□ -0.71
COL13A1-207ENST00000478219 ABCB11O95342 1321 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 IGSF9BQ9UPX0 1349 aa10.63□□□□□ -0.71
COL13A1-207ENST00000478219 O00370 1275 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ABLIM1O14639 778 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 DDX3YO15523 660 aaKnown RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ZSCAN9O15535 394 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CCNT1O60563 726 aaKnown RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 DDAH1O94760 285 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CYP1A1P04798 512 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 PLCG2P16885 1265 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 RCN2Q14257 317 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CERKLQ49MI3 558 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ZCWPW2Q504Y3 356 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 LRRC23Q53EV4 343 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ZNF449Q6P9G9 518 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 UNC13DQ70J99 1090 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 NCAPG2Q86XI2 1143 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ENDOVQ8N8Q3 282 aaKnown RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 MAIP1Q8WWC4 291 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CKAP2Q8WWK9 683 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 PNMA5Q96PV4 448 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 TGS1Q96RS0 853 aaKnown RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 PLA2G12BQ9BX93 195 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CPVLQ9H3G5 476 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CUEDC2Q9H467 287 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 PRDM16Q9HAZ2 1276 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 LRP2BPQ9P2M1 347 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CHKBQ9Y259 395 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 TTC36A6NLP5 189 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CBX6O95503 412 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 FOXN2P32314 431 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 LRRC63Q05C16 580 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 MUM1Q2TAK8 710 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 KHDC1Q4VXA5 237 aaKnown RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 TTC27Q6P3X3 843 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 CCDC25Q86WR0 208 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ALG3Q92685 438 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 TRIM7Q9C029 511 aa10.62□□□□□ -0.71
COL13A1-207ENST00000478219 TMX4Q9H1E5 349 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ARPP21Q9UBL0 812 aaPredicted RBP10.62□□□□□ -0.71
COL13A1-207ENST00000478219 ACSL3O95573 720 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CALM1P0DP23 149 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CALM2P0DP24 149 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CALM3P0DP25 149 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CALML3P27482 149 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PTGIRP43119 386 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CTSWP56202 376 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PABPC1LQ4VXU2 614 aaKnown RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CMPK2Q5EBM0 449 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 SV2BQ7L1I2 683 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 TRIM59Q8IWR1 403 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CYP4X1Q8N118 509 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 RAB3IPQ96QF0 476 aaPredicted RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 TMEM165Q9HC07 324 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PREBQ9HCU5 417 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 TMOD4Q9NZQ9 345 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms