RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TBC1D22BQ9NU19 505 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 OVOS2A0A0J9YW53 1432 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 OVOS2Q6IE36 1432 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 TJP3O95049 919 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 OR6B3Q8NGW1 331 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 C11orf70Q9BRQ4 267 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 TRIM56Q9BRZ2 755 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 MIF4GDA9UHW6 222 aaKnown RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 LPXNO60711 386 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 IREB2P48200 963 aaKnown RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 PDIK1LQ8N165 341 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 DEPDC1BQ8WUY9 529 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 NUP85Q9BW27 656 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CAPN11Q9UMQ6 739 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 EVI5O60447 810 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 STXBP2Q15833 593 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 ABI1Q8IZP0 508 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 WRNIP1Q96S55 665 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CCZ1BP86790 482 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CCZ1P86791 482 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 SWSAP1Q6NVH7 229 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF449Q6P9G9 518 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 PCGF5Q86SE9 256 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CHP1Q99653 195 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 A0A1W2PQC6 194 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 PFDN6O15212 129 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 FTLP02792 175 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 ARPP19P56211 112 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 PPP6R3Q5H9R7 873 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 TMCO4Q5TGY1 634 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 USP49Q70CQ1 688 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF668Q96K58 619 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
PTPN11-201ENST00000351677 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
PTPN11-201ENST00000351677 CTDNEP1O95476 244 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 MMEP08473 750 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 GCKP35557 465 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF564Q8TBZ8 553 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 PXDNLA1KZ92 1463 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 KCNB1Q14721 858 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 GLYCTKQ8IVS8 523 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 G3BP2Q9UN86 482 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 CSF1RP07333 972 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 RNASELQ05823 741 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 HIBCHQ6NVY1 386 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 PDXDC1Q6P996 788 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 FAF2Q96CS3 445 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 DPYDQ12882 1025 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 RC3H1Q5TC82 1133 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 RGL1Q9NZL6 768 aa17.16■□□□□ 0.34
PTPN11-201ENST00000351677 FNDC3AQ9Y2H6 1198 aaKnown RBP17.16■□□□□ 0.34
PTPN11-201ENST00000351677 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 TTC7AQ9ULT0 858 aaPredicted RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 ADRA2BP18089 450 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 USP11P51784 963 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 KRT76Q01546 638 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 SATB1Q01826 763 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 SPP2Q13103 211 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 MAML1Q92585 1016 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 SSTR3P32745 418 aaPredicted RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 MAPK6Q16659 721 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 LIMA1Q9UHB6 759 aaKnown RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
PTPN11-201ENST00000351677 MAGOHP61326 146 aaKnown RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 MARCH10Q8NA82 808 aaPredicted RBP17.15■□□□□ 0.34
PTPN11-201ENST00000351677 AFF2P51816 1311 aa17.14■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF185O15231 689 aa17.14■□□□□ 0.34
PTPN11-201ENST00000351677 NMT1P30419 496 aaKnown RBP17.14■□□□□ 0.34
PTPN11-201ENST00000351677 THOC5Q13769 683 aaKnown RBP17.14■□□□□ 0.34
PTPN11-201ENST00000351677 TMEM35BQ8NCS4 154 aa17.14■□□□□ 0.34
PTPN11-201ENST00000351677 NSUN6Q8TEA1 469 aaKnown RBP17.14■□□□□ 0.34
PTPN11-201ENST00000351677 MTRQ99707 1265 aa17.14■□□□□ 0.34
PTPN11-201ENST00000351677 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 RFX5P48382 616 aaPredicted RBP17.14■□□□□ 0.33
PTPN11-201ENST00000351677 LRGUKQ96M69 825 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 ZNF568Q3ZCX4 644 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
PTPN11-201ENST00000351677 GBP7Q8N8V2 638 aaPredicted RBP17.14■□□□□ 0.33
PTPN11-201ENST00000351677 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.331e-6■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms