RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FAM13CQ8NE31 585 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 LZTS2Q9BRK4 669 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 ETNK2Q9NVF9 386 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 MAGEC2Q9UBF1 373 aaPredicted RBP17■□□□□ 0.31
CTDSP1-201ENST00000273062 SIGLEC16A6NMB1 481 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 TCP11X1B4DZS4 312 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 PJA2O43164 708 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 RPL13P26373 211 aaKnown RBP17■□□□□ 0.31
CTDSP1-201ENST00000273062 CMPK2Q5EBM0 449 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 NID2Q14112 1375 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 KCNK3O14649 394 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 CCNB1P14635 433 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 KLRC1P26715 233 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 SLCO1A2P46721 670 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 MEI1Q5TIA1 1274 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 TTI2Q6NXR4 508 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 PTPRN2Q92932 1015 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 ZNF333Q96JL9 665 aa17■□□□□ 0.31
CTDSP1-201ENST00000273062 DUSP9Q99956 384 aaKnown RBP17■□□□□ 0.31
CTDSP1-201ENST00000273062 TTI1O43156 1089 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 ATP9AO75110 1047 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 DESP17661 470 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 PDE6CP51160 858 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 GRAPQ13588 217 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 RASA3Q14644 834 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 KIAA0753Q2KHM9 967 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 TSNAXIP1Q2TAA8 658 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 RRAGAQ7L523 313 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 EXOC3L1Q86VI1 746 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 CNOT6LQ96LI5 555 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 CARD9Q9H257 536 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 BHMG1C9JSJ3 638 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 PFDN1O60925 122 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 PENKP01210 267 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 P3H1Q32P28 736 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 CSGALNACT2Q8N6G5 542 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 MIPOL1Q8TD10 442 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 RXFP1Q9HBX9 757 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 USH1CQ9Y6N9 552 aa16.99■□□□□ 0.31
CTDSP1-201ENST00000273062 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 UNC5CO95185 931 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 AFPP02771 609 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 ZNF24P17028 368 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 HNRNPH3P31942 346 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 ASTE1Q2TB18 679 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 ZC3H18Q86VM9 953 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 TBC1D16Q8TBP0 767 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.315e-9■■■■■ 405
CTDSP1-201ENST00000273062 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 PACSIN1Q9BY11 444 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 NSRP1Q9H0G5 558 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 METTL5Q9NRN9 209 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 GFPT2O94808 682 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 PLOD1Q02809 727 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 RBBP8NLQ8NC74 664 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 NRG4Q8WWG1 115 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 SLC35B4Q969S0 331 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 TRIM51Q9BSJ1 452 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 CCDC134Q9H6E4 229 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 TMCO1Q9UM00 188 aa16.98■□□□□ 0.31
CTDSP1-201ENST00000273062 NVLO15381 856 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 SUN1O94901 812 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 UBTFL6P0CB48 400 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 GYS1P13807 737 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 MTIF2P46199 727 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 GPSM2P81274 684 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 CNGA2Q16280 664 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 IL17AQ16552 155 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 CERKLQ49MI3 558 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 GBP7Q8N8V2 638 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 SCFD2Q8WU76 684 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 GBP5Q96PP8 586 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 TIPINQ9BVW5 301 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 MYH6P13533 1939 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 A0A1W2PQJ5 194 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 FOXO6A8MYZ6 492 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 TJP3O95049 919 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 DEXIO95424 95 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 GJB6O95452 261 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 ZCCHC18P0CG32 403 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 CREB1P16220 341 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 TARSP26639 723 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 PKN1Q16512 942 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 CGB2Q6NT52 195 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 EIF1ADQ8N9N8 165 aaKnown RBP16.97■□□□□ 0.31
CTDSP1-201ENST00000273062 EPS8L3Q8TE67 593 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms