RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NFASCO94856 1347 aa10.35□□□□□ -0.75
LINC00838-201ENST00000562956 GRIN3BO60391 1043 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 PPP1R37O75864 691 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ACTR2P61160 394 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 XKR9Q5GH70 373 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 SWSAP1Q6NVH7 229 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 SEPT14Q6ZU15 432 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 FRMD5Q7Z6J6 570 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 CCDC43Q96MW1 224 aaKnown RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 LZTFL1Q9NQ48 299 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 DNAI1Q9UI46 699 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 GOLGA6L9A6NEM1 432 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 POTEB2H3BUK9 544 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 STBD1O95210 358 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 RPL13P26373 211 aaKnown RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 GTF2F1P35269 517 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 APBA1Q02410 837 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 KCNH2Q12809 1159 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 TSR1Q2NL82 804 aaKnown RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 FASTKD5Q7L8L6 764 aaKnown RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 CCDC60Q8IWA6 550 aaPredicted RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 CRACR2AQ9BSW2 395 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ANKEF1Q9NU02 776 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ARMCX3Q9UH62 379 aaPredicted RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 LCTP09848 1927 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 UBE4BO95155 1302 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 K7ENM7 598 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 PSAPP07602 524 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 PLS3P13797 630 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ABHD15Q6UXT9 468 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 STXBP4Q6ZWJ1 553 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ZNF397Q8NF99 534 aaPredicted RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 SLC10A4Q96EP9 437 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
LINC00838-201ENST00000562956 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
LINC00838-201ENST00000562956 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 SLC16A3O15427 465 aaKnown RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 NOL4O94818 638 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 NDUFA10O95299 355 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 ABL1P00519 1130 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 TUBB4AP04350 444 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 PGK2P07205 417 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 EDNRBP24530 442 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 ICAM3P32942 547 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 FAM133AQ8N9E0 248 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 NEK11Q8NG66 645 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 BAP1Q92560 729 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 ATP6V0A1Q93050 837 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 IQCDQ96DY2 449 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 WDR24Q96S15 920 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 AGPAT3Q9NRZ7 376 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 REXO2Q9Y3B8 237 aaKnown RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 EPN1Q9Y6I3 576 aaPredicted RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 EPB41P11171 864 aaKnown RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 OSBPP22059 807 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 SNAPC2Q13487 334 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 NFIL3Q16649 462 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 FAM102BQ5T8I3 360 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 BORCS6Q96GS4 357 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 LSM14BQ9BX40 385 aaKnown RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 GBP3Q9H0R5 595 aa10.33□□□□□ -0.76
LINC00838-201ENST00000562956 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
LINC00838-201ENST00000562956 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 LRRC53A6NM62 1247 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SLC25A27O95847 323 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 CYP2C8P10632 490 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 XRCC5P13010 732 aaKnown RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SOX10P56693 466 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 GNG11P61952 73 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 DCAF17Q5H9S7 520 aaPredicted RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 RRAGAQ7L523 313 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 CEP170P1Q96L14 293 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 NHEJ1Q9H9Q4 299 aaPredicted RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 PLAGL2Q9UPG8 496 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 TISP43B9A030 160 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 PLEKP08567 350 aaPredicted RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SUPT20HL2P0C7V6 817 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 UBA1P22314 1058 aaKnown RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
LINC00838-201ENST00000562956 CYP2J2P51589 502 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 PEX3P56589 373 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 PRKCEQ02156 737 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 MIS18BP1Q6P0N0 1132 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 OTUD6AQ7L8S5 288 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 EEPD1Q7L9B9 569 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 HS2ST1Q7LGA3 356 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SYCP3Q8IZU3 236 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SLC35C1Q96A29 364 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 FGD4Q96M96 766 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 DMAC2Q9NW81 257 aa10.32□□□□□ -0.76
LINC00838-201ENST00000562956 SCN4AP35499 1836 aa10.31□□□□□ -0.76
LINC00838-201ENST00000562956 SYNGAP1Q96PV0 1343 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms