RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 BRF1Q92994 677 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 GABBR1Q9UBS5 961 aa11.21□□□□□ -0.61
ACTN1-210ENST00000553779 PUF60Q9UHX1 559 aaKnown RBP11.21□□□□□ -0.61
ACTN1-210ENST00000553779 TDRD15B5MCY1 1934 aaKnown RBP11.2□□□□□ -0.62
ACTN1-210ENST00000553779 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 MAGEB2O15479 319 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 FGF18O76093 207 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 ATG7O95352 703 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 FGFR1P11362 822 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 CDC27P30260 824 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 CLCN3P51790 818 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
ACTN1-210ENST00000553779 ADAM15Q13444 863 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 ADCK5Q3MIX3 580 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 LLGL2Q6P1M3 1020 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 FAM43BQ6ZT52 329 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-210ENST00000553779 SUGP1Q8IWZ8 645 aaKnown RBP11.2□□□□□ -0.62
ACTN1-210ENST00000553779 KIAA0319LQ8IZA0 1049 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 NLRP7Q8WX94 980 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 TMEM161AQ9NX61 479 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 PCDHGC5Q9Y5F6 944 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 PCDHA10Q9Y5I2 948 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 KMT2EQ8IZD2 1858 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
ACTN1-210ENST00000553779 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 IGKV6D-21A0A0A0MT36 114 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 ESYT2A0FGR8 921 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 C19orf67A6NJJ6 358 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 PER2O15055 1255 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 MGEA5O60502 916 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 GAS7O60861 476 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 C22orf31O95567 290 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 CPA1P15085 419 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 ADD1P35611 737 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 PPM1AP35813 382 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 KRT17Q04695 432 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 FUT2Q10981 343 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 BMS1Q14692 1282 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 FAM102BQ5T8I3 360 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 EFCAB12Q6NXP0 572 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 ALYREFQ86V81 257 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 FAM228AQ86W67 206 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 LRRC43Q8N309 656 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 SMRP1Q8NCR6 262 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 PHKBQ93100 1093 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 RPGRIP1Q96KN7 1286 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 ZNF558Q96NG5 402 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 CDCA3Q99618 268 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 TEKT3Q9BXF9 490 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 CDHR5Q9HBB8 845 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
ACTN1-210ENST00000553779 TYW1Q9NV66 732 aaKnown RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 SEPT9Q9UHD8 586 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-210ENST00000553779 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 CPLX1O14810 134 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 OATP04181 439 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 CYP3A4P08684 503 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 PSMA5P28066 241 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TECP42680 631 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 JAK3P52333 1124 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
ACTN1-210ENST00000553779 NLRP5P59047 1200 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 PRKCEQ02156 737 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TBC1D8BQ0IIM8 1120 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 COASYQ13057 564 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 HERC4Q5GLZ8 1057 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-210ENST00000553779 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 HFE2Q6ZVN8 426 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TMC7Q7Z402 723 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 SKAP1Q86WV1 359 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 LRRC71Q8N4P6 559 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 ZNF668Q96K58 619 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 APOL5Q9BWW9 433 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 KCNH6Q9H252 994 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
ACTN1-210ENST00000553779 TMEM221A6NGB7 291 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 C9IYK1 514 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 M0R296 226 aa11.17□□□□□ -0.62
ACTN1-210ENST00000553779 DHX15O43143 795 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms