RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 RBM25P49756 843 aaKnown RBP17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 TRIM67Q6ZTA4 783 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 CKAP2LQ8IYA6 745 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 THNSL1Q8IYQ7 743 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 ZNF713Q8N859 430 aaPredicted RBP17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 TMEM40Q8WWA1 233 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 TLE6Q9H808 572 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 ZNF302Q9NR11 478 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 TLR9Q9NR96 1032 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 AAASQ9NRG9 546 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 TCEAL9Q9UHQ7 104 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 SMCO2A6NFE2 343 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 MEIS1O00470 390 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 PER2O15055 1255 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 ATG7O95352 703 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 KIZQ2M2Z5 673 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 ODR4Q5SWX8 454 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 MIS18BP1Q6P0N0 1132 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 ABHD15Q6UXT9 468 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 KIAA0319LQ8IZA0 1049 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 COLGALT1Q8NBJ5 622 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 ASIC4Q96FT7 647 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 OSMRQ99650 979 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 CDHR5Q9HBB8 845 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 C1orf112Q9NSG2 853 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 BARHL2Q9NY43 387 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 NAP1L2Q9ULW6 460 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 ST3GAL5Q9UNP4 418 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 V9GY48 417 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 MYO10Q9HD67 2058 aa17.84■□□□□ 0.45
CHMP4A-207ENST00000533523 IGKV6D-21A0A0A0MT36 114 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 KLF18A0A0U1RQI7 1052 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 LOC730098B7Z3J9 87 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 FGF18O76093 207 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 FGFR1P11362 822 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 PTPN5P54829 565 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 RBM10P98175 930 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 UBE3AQ05086 875 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 FUT2Q10981 343 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 ZNF484Q5JVG2 852 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM102BQ5T8I3 360 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 JAKMIP3Q5VZ66 844 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 PLPP4Q5VZY2 271 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 NIPA1Q7RTP0 329 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 TRMT1LQ7Z2T5 733 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 TEX2Q8IWB9 1127 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 GLT8D2Q9H1C3 349 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 RGS18Q9NS28 235 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 BRPF3Q9ULD4 1205 aa17.83■□□□□ 0.44
CHMP4A-207ENST00000533523 ZBTB42B2RXF5 422 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 C9IYK1 514 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM86B1E9PN63 330 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 GPR182O15218 404 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 GFRA3O60609 400 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 C22orf31O95567 290 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 PDGFBP01127 241 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 VTNP04004 478 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM86B2P0C5J1 330 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 RPS6KB1P23443 525 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 CLK2P49760 499 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 SWSAP1Q6NVH7 229 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 Q6ZUG5 572 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 SLC24A5Q71RS6 500 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM228AQ86W67 206 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 FBXL16Q8N461 479 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 METTL13Q8N6R0 699 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 RPGRIP1Q96KN7 1286 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 PHF7Q9BWX1 381 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 ATP6V0A4Q9HBG4 840 aa17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 TYW1Q9NV66 732 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 KMT2BQ9UMN6 2715 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-207ENST00000533523 CCDC196A0A1B0GTZ2 297 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 FSD2A1L4K1 749 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 IPO5O00410 1097 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 SRGAP2BP0DMP2 458 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 LAG3P18627 525 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 ZXDAP98168 799 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 CBX2Q14781 532 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 DUSP6Q16828 381 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 SUGP1Q8IWZ8 645 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 VN1R2Q8NFZ6 395 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 PBXIP1Q96AQ6 731 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 ENTPD7Q9NQZ7 604 aa17.81■□□□□ 0.44
CHMP4A-207ENST00000533523 CPA1P15085 419 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 CLCN3P51790 818 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 CRYBB1P53674 252 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 ANAPC15P60006 121 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 ERVFC1P60507 584 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 BRF1Q92994 677 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 CDCA3Q99618 268 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 TMEM161AQ9NX61 479 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 AKT3Q9Y243 479 aa17.8■□□□□ 0.44
CHMP4A-207ENST00000533523 IGLV3-22A0A075B6J6 115 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 FSCN2O14926 492 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms