RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 SWSAP1Q6NVH7 229 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 BMP8AQ7Z5Y6 402 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 RBM23Q86U06 439 aaKnown RBP8.95□□□□□ -0.98
GM2A-202ENST00000523004 ALYREFQ86V81 257 aaKnown RBP8.95□□□□□ -0.98
GM2A-202ENST00000523004 RASEFQ8IZ41 740 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 EDAQ92838 391 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 MFSD14AQ96MC6 490 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 AAASQ9NRG9 546 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 TBC1D22BQ9NU19 505 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 PCDHB12Q9Y5F1 795 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 PCDHGC5Q9Y5F6 944 aa8.95□□□□□ -0.98
GM2A-202ENST00000523004 MAFBQ9Y5Q3 323 aaPredicted RBP8.95□□□□□ -0.98
GM2A-202ENST00000523004 FSD2A1L4K1 749 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 TBKBP1A7MCY6 615 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 ADAMTS3O15072 1205 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 PPFIA3O75145 1194 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 GPR32O75388 356 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 FGF18O76093 207 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 MRE11P49959 708 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 ERVFC1P60507 584 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 BECN1Q14457 450 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 KRT32Q14532 448 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 DSC3Q14574 896 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 CBX2Q14781 532 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 KIZQ2M2Z5 673 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 JAKMIP3Q5VZ66 844 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 MCTP2Q6DN12 878 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 PDE12Q6L8Q7 609 aaKnown RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 FAM228AQ86W67 206 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 CKAP2LQ8IYA6 745 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 SMAP1Q8IYB5 467 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 COLGALT1Q8NBJ5 622 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 VN1R2Q8NFZ6 395 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 BBXQ8WY36 941 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 ZMYND12Q9H0C1 365 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 CWH43Q9H720 699 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 ELAC1Q9H777 363 aaKnown RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 TLE6Q9H808 572 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 TLR9Q9NR96 1032 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 TYW1Q9NV66 732 aaKnown RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 TMEM161AQ9NX61 479 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 HCSTQ9UBK5 93 aa8.94□□□□□ -0.98
GM2A-202ENST00000523004 BARX2Q9UMQ3 279 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 USP15Q9Y4E8 981 aaPredicted RBP8.94□□□□□ -0.98
GM2A-202ENST00000523004 CCDC196A0A1B0GTZ2 297 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 FSCN2O14926 492 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 PER2O15055 1255 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 MAGEB2O15479 319 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 VTNP04004 478 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 FGFR1P11362 822 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 ATF7P17544 494 aaPredicted RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 IBSPP21815 317 aaPredicted RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 CIITAP33076 1130 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 SETQ01105 290 aaPredicted RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 KCNC3Q14003 757 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 PKN1Q16512 942 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 DUSP6Q16828 381 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 SPOUT1Q5T280 376 aaKnown RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 TMEM184AQ6ZMB5 413 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 TRIM67Q6ZTA4 783 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 THNSL1Q8IYQ7 743 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 REXO1Q8N1G1 1221 aaKnown RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 LINC01465Q8N7H1 131 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 SUSD6Q92537 303 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 CDCA3Q99618 268 aaPredicted RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 OSMRQ99650 979 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 ZNF577Q9BSK1 485 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 PHF7Q9BWX1 381 aaPredicted RBP8.93□□□□□ -0.98
GM2A-202ENST00000523004 ATP6V0A4Q9HBG4 840 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 LZTS1Q9Y250 596 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 PCDHA10Q9Y5I2 948 aa8.93□□□□□ -0.98
GM2A-202ENST00000523004 NID2Q14112 1375 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 PRPF3O43395 683 aaKnown RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 PSAPP07602 524 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 LAG3P18627 525 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 METAP2P50579 478 aaKnown RBP eCLIP8.92□□□□□ -0.98
GM2A-202ENST00000523004 CLCN3P51790 818 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 NLRP11P59045 1033 aaKnown RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 ZXDAP98168 799 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 RBM10P98175 930 aaKnown RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 PRR16Q569H4 304 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 LRRC55Q6ZSA7 311 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 TRMT1LQ7Z2T5 733 aaKnown RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 RASGRP4Q8TDF6 673 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 CCDC12Q8WUD4 166 aaPredicted RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 MRPS27Q92552 414 aaKnown RBP8.92□□□□□ -0.98
GM2A-202ENST00000523004 KCNB2Q92953 911 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 LENG9Q96B70 501 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 FAM167AQ96KS9 214 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 CASD1Q96PB1 797 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 PPP1R16BQ96T49 567 aa8.92□□□□□ -0.98
GM2A-202ENST00000523004 TMEM117Q9H0C3 514 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms