RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TMOD1P28289 359 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 MARCKSP29966 332 aaPredicted RBP20.84■□□□□ 0.93
LMNA-204ENST00000368298 EPHB4P54760 987 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 MRPS6P82932 125 aaKnown RBP20.84■□□□□ 0.93
LMNA-204ENST00000368298 XKR9Q5GH70 373 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 HABP4Q5JVS0 413 aaKnown RBP20.84■□□□□ 0.93
LMNA-204ENST00000368298 POTEGQ6S5H5 508 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 PIGOQ8TEQ8 1089 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 FAM49AQ9H0Q0 323 aaPredicted RBP20.84■□□□□ 0.93
LMNA-204ENST00000368298 SCN5AQ14524 2016 aa20.84■□□□□ 0.93
LMNA-204ENST00000368298 SPTLC2O15270 562 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 GAS2O43903 313 aaKnown RBP20.83■□□□□ 0.93
LMNA-204ENST00000368298 NBNO60934 754 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.93
LMNA-204ENST00000368298 MKRN4PQ13434 485 aaPredicted RBP20.83■□□□□ 0.93
LMNA-204ENST00000368298 STK38Q15208 465 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 CHRDL2Q6WN34 429 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 METTL13Q8N6R0 699 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 KRI1Q8N9T8 703 aaKnown RBP20.83■□□□□ 0.93
LMNA-204ENST00000368298 SLC7A3Q8WY07 619 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 UBE2OQ9C0C9 1292 aaKnown RBP20.83■□□□□ 0.93
LMNA-204ENST00000368298 NT5C3AQ9H0P0 336 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 KIAA1024Q9UPX6 916 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 SQORQ9Y6N5 450 aa20.83■□□□□ 0.93
LMNA-204ENST00000368298 A0A1W2PPC1 479 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 DGAT1O75907 488 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 CLEC17AQ6ZS10 378 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 LRRC71Q8N4P6 559 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 CELF4Q9BZC1 486 aaKnown RBP20.82■□□□□ 0.92
LMNA-204ENST00000368298 CCSER1Q9C0I3 900 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 CSRNP2Q9H175 543 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 DDX19AQ9NUU7 478 aaKnown RBP20.82■□□□□ 0.92
LMNA-204ENST00000368298 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 LOXHD1Q8IVV2 1947 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 SIP14410 1827 aa20.82■□□□□ 0.92
LMNA-204ENST00000368298 UBA7P41226 1012 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 DNM2P50570 870 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 CLCN3P51790 818 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 POLGP54098 1239 aaPredicted RBP20.81■□□□□ 0.92
LMNA-204ENST00000368298 CDC42EP1Q00587 391 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 GRB10Q13322 594 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 TMEM240Q5SV17 173 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 CABP7Q86V35 215 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 PNMA5Q96PV4 448 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 MAP7D2Q96T17 732 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 SUGCTQ9HAC7 445 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 TRPV2Q9Y5S1 764 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 CDY2AQ9Y6F7 541 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 A0A087WWV3 80 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 M0QZ92 97 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 GPR32O75388 356 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 CTSHP09668 335 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 FOXD4L6Q3SYB3 417 aaPredicted RBP20.81■□□□□ 0.92
LMNA-204ENST00000368298 TMEM119Q4V9L6 283 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 PSRC1Q6PGN9 363 aaPredicted RBP20.81■□□□□ 0.92
LMNA-204ENST00000368298 FOXD4L3Q6VB84 417 aaPredicted RBP20.81■□□□□ 0.92
LMNA-204ENST00000368298 KCNG4Q8TDN1 519 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 CLIC6Q96NY7 704 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.81■□□□□ 0.924e-8■□□□□ 10.2
LMNA-204ENST00000368298 XPNPEP1Q9NQW7 623 aa20.81■□□□□ 0.92
LMNA-204ENST00000368298 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 EYA4O95677 639 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 PTMSP20962 102 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 DRP2Q13474 957 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 EMC2Q15006 297 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 FAM43BQ6ZT52 329 aaPredicted RBP20.8■□□□□ 0.92
LMNA-204ENST00000368298 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 DEFB128Q7Z7B8 93 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 TCP11Q8WWU5 503 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 ADAMTS10Q9H324 1103 aa20.8■□□□□ 0.92
LMNA-204ENST00000368298 FGBP02675 491 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 VTNP04004 478 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 ACRP10323 421 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 CRYBB1P53674 252 aaPredicted RBP20.79■□□□□ 0.92
LMNA-204ENST00000368298 KRT85P78386 507 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 PLEKHG4Q58EX7 1191 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 FBXO47Q5MNV8 452 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 RASIP1Q5U651 963 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 KCNK18Q7Z418 384 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 TDHQ8IZJ6 230 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 CALML4Q96GE6 196 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 EPSTI1Q96J88 318 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 MTRQ99707 1265 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 OSBPL7Q9BZF2 842 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 BHMT2Q9H2M3 363 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 ATP6V0A4Q9HBG4 840 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 AKT3Q9Y243 479 aa20.79■□□□□ 0.92
LMNA-204ENST00000368298 E9PMD0 336 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 CUTAO60888 179 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 TMEM62Q0P6H9 643 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 LPIN1Q14693 890 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 SHHQ15465 462 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 AXDND1Q5T1B0 1012 aaPredicted RBP20.78■□□□□ 0.92
LMNA-204ENST00000368298 USP49Q70CQ1 688 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 HERVK_113Q902F9 699 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 CDK5RAP3Q96JB5 506 aa20.78■□□□□ 0.92
LMNA-204ENST00000368298 CCDC43Q96MW1 224 aaKnown RBP20.78■□□□□ 0.92
LMNA-204ENST00000368298 CDHR5Q9HBB8 845 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms