RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 AGO3Q9H9G7 860 aaKnown RBP19.18■□□□□ 0.66
CCS-203ENST00000526058 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
CCS-203ENST00000526058 KCNMB3Q9NPA1 279 aa19.18■□□□□ 0.66
CCS-203ENST00000526058 TRPV2Q9Y5S1 764 aa19.18■□□□□ 0.66
CCS-203ENST00000526058 RFXAPO00287 272 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 C22orf31O95567 290 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 RPLP2P05387 115 aaKnown RBP19.17■□□□□ 0.66
CCS-203ENST00000526058 PRKCEQ02156 737 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 DIS3L2Q8IYB7 885 aaKnown RBP19.17■□□□□ 0.66
CCS-203ENST00000526058 NME8Q8N427 588 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 SLC17A8Q8NDX2 589 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 RAD9AQ99638 391 aa19.17■□□□□ 0.66
CCS-203ENST00000526058 CELF4Q9BZC1 486 aaKnown RBP19.17■□□□□ 0.66
CCS-203ENST00000526058 EPOPA6NHQ4 379 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 M0QZ92 97 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 OATP04181 439 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 GCFC2P16383 781 aaKnown RBP19.16■□□□□ 0.66
CCS-203ENST00000526058 CD52P31358 61 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 GUCY1B3Q02153 619 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 TRIM29Q14134 588 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 TSHZ1Q6ZSZ6 1077 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 RDM1Q8NG50 284 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 HAS1Q92839 578 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 FAM167AQ96KS9 214 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
CCS-203ENST00000526058 CDHR5Q9HBB8 845 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 NRBP2Q9NSY0 501 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 VAV3Q9UKW4 847 aa19.16■□□□□ 0.66
CCS-203ENST00000526058 SPTBN5Q9NRC6 3674 aaKnown RBP19.15■□□□□ 0.66
CCS-203ENST00000526058 EML1O00423 815 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 UPP2O95045 317 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 RABEP1Q15276 862 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 METTL13Q8N6R0 699 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 BANK1Q8NDB2 785 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 ARNTL2Q8WYA1 636 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 TOP1MTQ969P6 601 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 FAM20AQ96MK3 541 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 PPP1R16BQ96T49 567 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 NAP1L4Q99733 375 aaKnown RBP19.15■□□□□ 0.66
CCS-203ENST00000526058 SH2B1Q9NRF2 756 aaPredicted RBP19.15■□□□□ 0.66
CCS-203ENST00000526058 CEP131Q9UPN4 1083 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 GINS2Q9Y248 185 aa19.15■□□□□ 0.66
CCS-203ENST00000526058 TMEM150BA6NC51 233 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 WNT7AO00755 349 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 ENPP3O14638 875 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 STBD1O95210 358 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 IGFBP4P22692 258 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 PPP2R5CQ13362 524 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 PADI3Q9ULW8 664 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 INSL6Q9Y581 213 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 SQORQ9Y6N5 450 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 KDM3AQ9Y4C1 1321 aa19.14■□□□□ 0.65
CCS-203ENST00000526058 TTC3P53804 2025 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 PRRC2BQ5JSZ5 2229 aaKnown RBP19.13■□□□□ 0.65
CCS-203ENST00000526058 LINC01553A4QN01 128 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 TBX3O15119 743 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 VTNP04004 478 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 CLCN3P51790 818 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 HTRA4P83105 476 aaPredicted RBP19.13■□□□□ 0.65
CCS-203ENST00000526058 TMEM266Q2M3C6 531 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 EFCAB12Q6NXP0 572 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 RTN4RL1Q86UN2 441 aaPredicted RBP19.13■□□□□ 0.65
CCS-203ENST00000526058 LRRC71Q8N4P6 559 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 USP38Q8NB14 1042 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 LINC01599Q8WXQ3 324 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 C8orf76Q96K31 380 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 SH2D3AQ9BRG2 576 aa19.13■□□□□ 0.65
CCS-203ENST00000526058 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
CCS-203ENST00000526058 MAGEB2O15479 319 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 MARCH6O60337 910 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 PAK2Q13177 524 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 TARBP2Q15633 366 aaKnown RBP19.12■□□□□ 0.65
CCS-203ENST00000526058 KIZQ2M2Z5 673 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 XKR3Q5GH77 459 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 LINC01465Q8N7H1 131 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 TMEM40Q8WWA1 233 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 PPM1EQ8WY54 764 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 SEPT9Q9UHD8 586 aaPredicted RBP19.12■□□□□ 0.65
CCS-203ENST00000526058 MTUS1Q9ULD2 1270 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 NOC2LQ9Y3T9 749 aaKnown RBP19.12■□□□□ 0.65
CCS-203ENST00000526058 VCANP13611 3396 aa19.12■□□□□ 0.65
CCS-203ENST00000526058 GPR32O75388 356 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 CD2BP2O95400 341 aaKnown RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 PSMC5P62195 406 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 CCDC85BQ15834 202 aaPredicted RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 MTERF2Q49AM1 385 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 SP7Q8TDD2 431 aaPredicted RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 CEP89Q96ST8 783 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 OSMRQ99650 979 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 NIFKQ9BYG3 293 aaKnown RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 TMX1Q9H3N1 280 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 SUGCTQ9HAC7 445 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 AKT3Q9Y243 479 aa19.11■□□□□ 0.65
CCS-203ENST00000526058 COL4A4P53420 1690 aaPredicted RBP19.11■□□□□ 0.65
CCS-203ENST00000526058 DDX11L8A8MPP1 907 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 ST18O60284 1047 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 RPS6KA5O75582 802 aa19.1■□□□□ 0.65
CCS-203ENST00000526058 BAG4O95429 457 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms