RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 FAM167AQ96KS9 214 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 FAM20AQ96MK3 541 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 GAS2L1Q99501 681 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 RAD9AQ99638 391 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 AGO3Q9H9G7 860 aaKnown RBP20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 CERS4Q9HA82 394 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 NRBP2Q9NSY0 501 aa20.16■□□□□ 0.82
TRAPPC9-211ENST00000521700 OATP04181 439 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 TSHZ1Q6ZSZ6 1077 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 HAS1Q92839 578 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 TOP1MTQ969P6 601 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 NAP1L4Q99733 375 aaKnown RBP20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 CEP131Q9UPN4 1083 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 SQORQ9Y6N5 450 aa20.15■□□□□ 0.82
TRAPPC9-211ENST00000521700 LOXHD1Q8IVV2 1947 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 KDM3AQ9Y4C1 1321 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 M0QZ92 97 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 RFXAPO00287 272 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 CD52P31358 61 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 PRKCEQ02156 737 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 RABEP1Q15276 862 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 SPRED2Q7Z698 418 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 CDHR5Q9HBB8 845 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 VAV3Q9UKW4 847 aa20.14■□□□□ 0.81
TRAPPC9-211ENST00000521700 EML1O00423 815 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 ENPP3O14638 875 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 TBX3O15119 743 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 MAGEB2O15479 319 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 STBD1O95210 358 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 HTRA4P83105 476 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 GUCY1B3Q02153 619 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 PPP2R5CQ13362 524 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 METTL13Q8N6R0 699 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 USP38Q8NB14 1042 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 INSL6Q9Y581 213 aa20.13■□□□□ 0.81
TRAPPC9-211ENST00000521700 EPOPA6NHQ4 379 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 UPP2O95045 317 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 IGFBP4P22692 258 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 TARBP2Q15633 366 aaKnown RBP20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 EFCAB12Q6NXP0 572 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 ARNTL2Q8WYA1 636 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 PADI3Q9ULW8 664 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 GINS2Q9Y248 185 aa20.12■□□□□ 0.81
TRAPPC9-211ENST00000521700 LINC01553A4QN01 128 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 WNT7AO00755 349 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 MARCH6O60337 910 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 HMGN5P82970 282 aaKnown RBP20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 XKR3Q5GH77 459 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 RTN4RL1Q86UN2 441 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 LINC01465Q8N7H1 131 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 BANK1Q8NDB2 785 aa20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 NIFKQ9BYG3 293 aaKnown RBP20.11■□□□□ 0.81
TRAPPC9-211ENST00000521700 TMEM150BA6NC51 233 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 BAG4O95429 457 aaKnown RBP20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 VTNP04004 478 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 CLCN3P51790 818 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 PSMC5P62195 406 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 SAFBQ15424 915 aaKnown RBP eCLIP20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 KIZQ2M2Z5 673 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 LRRC71Q8N4P6 559 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 SP7Q8TDD2 431 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 TMEM40Q8WWA1 233 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 LINC01599Q8WXQ3 324 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 PPP1R16BQ96T49 567 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 CHD7Q9P2D1 2997 aa20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 SEPT9Q9UHD8 586 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 NOC2LQ9Y3T9 749 aaKnown RBP20.1■□□□□ 0.81
TRAPPC9-211ENST00000521700 DDX11L8A8MPP1 907 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 ST18O60284 1047 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 GPR32O75388 356 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 CRYBB1P53674 252 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 ERVK-21P61565 698 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 SPIRE1Q08AE8 756 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 PAK2Q13177 524 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 EPHA7Q15375 998 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 SLFN12Q8IYM2 578 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 CEP89Q96ST8 783 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 YME1L1Q96TA2 773 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 SH2D3AQ9BRG2 576 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 FTHL17Q9BXU8 183 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 SUGCTQ9HAC7 445 aa20.09■□□□□ 0.81
TRAPPC9-211ENST00000521700 RPS6KA5O75582 802 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 P4HBP07237 508 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 TMOD1P28289 359 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 QARSP47897 775 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 TBC1D8BQ0IIM8 1120 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 NFX1Q12986 1120 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 MTERF2Q49AM1 385 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 ANO5Q75V66 913 aa20.08■□□□□ 0.81
TRAPPC9-211ENST00000521700 PPM1EQ8WY54 764 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms