RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 HDAC7Q8WUI4 952 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 POMGNT1Q8WZA1 660 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 RUBCNQ92622 972 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 PARVGQ9HBI0 331 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 KCND1Q9NSA2 647 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 INTS13Q9NVM9 706 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 GOLGA8IPA6NC78 632 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 GOLGA8JA6NMD2 632 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MAP2K7O14733 419 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MAN1A1P33908 653 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 RWDD2BP57060 319 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CAPRIN2Q6IMN6 1127 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TGS1Q96RS0 853 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 SLITRK6Q9H5Y7 841 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 VWDEQ8N2E2 1590 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 A0A0G2JND7 137 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 KIF1CO43896 1103 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TOM1O60784 492 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 PTK2Q05397 1052 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 GRM4Q14833 912 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 PAPD7Q5XG87 772 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 RNF207Q6ZRF8 634 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 ZC3H18Q86VM9 953 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 RHOT2Q8IXI1 618 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MYCBPAPQ8TBZ2 947 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 HAUS1Q96CS2 278 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CYTH2Q99418 400 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DNAJC7Q99615 494 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 BCS1LQ9Y276 419 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MROH2AA6NES4 1674 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 INHBAP08476 426 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 SKIP12755 728 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DRP2Q13474 957 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MAP7Q14244 749 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DRAP1Q14919 205 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 KIF2BQ8N4N8 673 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CASKIN2Q8WXE0 1202 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TEKT1Q969V4 418 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 IWS1Q96ST2 819 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TEKT3Q9BXF9 490 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 SYNGAP1Q96PV0 1343 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MYMKA6NI61 221 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 PLS3P13797 630 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 MXI1P50539 228 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 CFAP57Q96MR6 1250 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 DBR1Q9UK59 544 aaKnown RBP8.36□□□□□ -1.07
CLCN3-209ENST00000513761 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
CLCN3-209ENST00000513761 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 NTRK3Q16288 839 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 CCDC137Q6PK04 289 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 KIRREL3Q8IZU9 778 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 XPO6Q96QU8 1125 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ANO3Q9BYT9 981 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 PNMA6FA0A0J9YX94 578 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ENO4A6NNW6 628 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 NOL3O60936 208 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 COG7P83436 770 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 CEP95Q96GE4 821 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SAYSD1Q9NPB0 183 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 BMP6P22004 513 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 HSD17B3P37058 310 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 LIG4P49917 911 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 FAM98CQ17RN3 349 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 KNOP1Q1ED39 458 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 EPM2AIP1Q7L775 607 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 FBXO41Q8TF61 875 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 MAD1L1Q9Y6D9 718 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 PIK3C2BO00750 1634 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ZSCAN5CA6NGD5 496 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 COPB2P35606 906 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 RAD23BP54727 409 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 CCDC14Q49A88 953 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SCYL2Q6P3W7 929 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 CYB5D1Q6P9G0 228 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 RPUSD2Q8IZ73 545 aaKnown RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ZNF577Q9BSK1 485 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 OSBPL1AQ9BXW6 950 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ADAM33Q9BZ11 813 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 MINPP1Q9UNW1 487 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 CFAP73A6NFT4 308 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 MAP3K7O43318 606 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 FOSP01100 380 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ERFP50548 548 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 ZNF354CQ86Y25 554 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 USP38Q8NB14 1042 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 MAML1Q92585 1016 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 LRRC37BQ96QE4 947 aa8.35□□□□□ -1.07
CLCN3-209ENST00000513761 TTC7AQ9ULT0 858 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-209ENST00000513761 hCG_1984214I3L0E3 225 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms