RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PTCRAQ6ISU1 281 aaPredicted RBP20.12■□□□□ 0.81
GPC1-203ENST00000425056 KIAA0319LQ8IZA0 1049 aa20.12■□□□□ 0.81
GPC1-203ENST00000425056 RASGRP4Q8TDF6 673 aa20.12■□□□□ 0.81
GPC1-203ENST00000425056 BBXQ8WY36 941 aaPredicted RBP20.12■□□□□ 0.81
GPC1-203ENST00000425056 LENG9Q96B70 501 aa20.12■□□□□ 0.81
GPC1-203ENST00000425056 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
GPC1-203ENST00000425056 C22orf31O95567 290 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 MMP1P03956 469 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 STAG3L1P0CL83 205 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 IL9P15248 144 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 PDIA3P30101 505 aaKnown RBP20.11■□□□□ 0.81
GPC1-203ENST00000425056 PUS10Q3MIT2 529 aaKnown RBP20.11■□□□□ 0.81
GPC1-203ENST00000425056 PRR16Q569H4 304 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 FAM178BQ8IXR5 827 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 P2RX5Q93086 422 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 UIMC1Q96RL1 719 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 SLC26A6Q9BXS9 759 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 ERVK-5Q9HDB9 667 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 CD320Q9NPF0 282 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 TCEAL9Q9UHQ7 104 aa20.11■□□□□ 0.81
GPC1-203ENST00000425056 FNDC1Q4ZHG4 1894 aaPredicted RBP20.1■□□□□ 0.81
GPC1-203ENST00000425056 GRXCR2A6NFK2 248 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 H3BQ06 376 aaPredicted RBP20.1■□□□□ 0.81
GPC1-203ENST00000425056 PPFIA3O75145 1194 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 PSAPP07602 524 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 TMEM266Q2M3C6 531 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 CKAP2LQ8IYA6 745 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 TMEM40Q8WWA1 233 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 KHSRPQ92945 711 aaKnown RBP eCLIP20.1■□□□□ 0.81
GPC1-203ENST00000425056 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 NCOA5Q9HCD5 579 aaKnown RBP20.1■□□□□ 0.81
GPC1-203ENST00000425056 SH3GLB2Q9NR46 395 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 VPS54Q9P1Q0 977 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 PCDHA10Q9Y5I2 948 aa20.1■□□□□ 0.81
GPC1-203ENST00000425056 NCK2O43639 380 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 MGEA5O60502 916 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 RPS6KA5O75582 802 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 SARSP49591 514 aaKnown RBP20.09■□□□□ 0.81
GPC1-203ENST00000425056 NFX1Q12986 1120 aaKnown RBP20.09■□□□□ 0.81
GPC1-203ENST00000425056 TOB2Q14106 344 aaPredicted RBP20.09■□□□□ 0.81
GPC1-203ENST00000425056 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 NAALADL2Q58DX5 795 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 RUFY3Q7L099 469 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 CDHR5Q9HBB8 845 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 ZSWIM6Q9HCJ5 1215 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 GINS2Q9Y248 185 aa20.09■□□□□ 0.81
GPC1-203ENST00000425056 NOC2LQ9Y3T9 749 aaKnown RBP20.09■□□□□ 0.81
GPC1-203ENST00000425056 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 EDIL3O43854 480 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 CCT2P78371 535 aaKnown RBP20.08■□□□□ 0.81
GPC1-203ENST00000425056 HYAL1Q12794 435 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 CAMK1Q14012 370 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 PAN2Q504Q3 1202 aaKnown RBP20.08■□□□□ 0.81
GPC1-203ENST00000425056 ODR4Q5SWX8 454 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 FAM167AQ96KS9 214 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 CLDND1Q9NY35 253 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 GABBR1Q9UBS5 961 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 RAPGEFL1Q9UHV5 662 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 CEP131Q9UPN4 1083 aa20.08■□□□□ 0.81
GPC1-203ENST00000425056 PLXNA4Q9HCM2 1894 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 LTBRP36941 435 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 USP11P51784 963 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 CRYBB1P53674 252 aaPredicted RBP20.07■□□□□ 0.8
GPC1-203ENST00000425056 KIZQ2M2Z5 673 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 GJD3Q8N144 294 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 RIT2Q99578 217 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 OSMRQ99650 979 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 ALG13Q9NP73 1137 aaKnown RBP20.07■□□□□ 0.8
GPC1-203ENST00000425056 C1orf112Q9NSG2 853 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 LRFN2Q9ULH4 789 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 ST3GAL5Q9UNP4 418 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 SAMM50Q9Y512 469 aa20.07■□□□□ 0.8
GPC1-203ENST00000425056 GPR182O15218 404 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 MSH4O15457 936 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 GPR32O75388 356 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 VTNP04004 478 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 ITGB1P05556 798 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 GATMP50440 423 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 EP400NLQ6ZTU2 488 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 FAM228AQ86W67 206 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 LINC01465Q8N7H1 131 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 ADAM2Q99965 735 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 RGS18Q9NS28 235 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 RNF216Q9NWF9 866 aaPredicted RBP20.06■□□□□ 0.8
GPC1-203ENST00000425056 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
GPC1-203ENST00000425056 DENND3A2RUS2 1198 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 C9IYK1 514 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 PI4K2BG5E9Z4 385 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 MAGEB2O15479 319 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 ZNF862O60290 1169 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 CLCN3P51790 818 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 NLRP5P59047 1200 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 SLC24A5Q71RS6 500 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 METTL13Q8N6R0 699 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 KLHL23Q8NBE8 558 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 SPPL3Q8TCT6 385 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 SLC5A5Q92911 643 aa20.05■□□□□ 0.8
GPC1-203ENST00000425056 PPP1R16BQ96T49 567 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms