RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PLEKHG4Q58EX7 1191 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 MARCH8Q5T0T0 291 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 POTEBQ6S5H4 581 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ABHD15Q6UXT9 468 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 PLPPR4Q7Z2D5 763 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 SPRED2Q7Z698 418 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ARNTL2Q8WYA1 636 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 TBC1D32Q96NH3 1257 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 TBC1D22BQ9NU19 505 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 ORC3Q9UBD5 711 aaPredicted RBP15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 CDY2AQ9Y6F7 541 aa15.44■□□□□ 0.06
VPS9D1-204ENST00000565023 MSH4O15457 936 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 EDIL3O43854 480 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 CAND2O75155 1236 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 CHRNA1P02708 482 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 AMHP03971 560 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 CIITAP33076 1130 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 INF2Q27J81 1249 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 LENG9Q96B70 501 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 IFIH1Q9BYX4 1025 aaKnown RBP15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 GABBR1Q9UBS5 961 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
VPS9D1-204ENST00000565023 GAS7O60861 476 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 EFCAB14O75071 495 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 PSAPP07602 524 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 XBP1P17861 261 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 IBSPP21815 317 aaPredicted RBP15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 MRPS6P82932 125 aaKnown RBP15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 KRT76Q01546 638 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 TAP1Q03518 808 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 FAM26DQ5JW98 314 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 LRCH2Q5VUJ6 765 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 ZNF746Q6NUN9 644 aaPredicted RBP15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 TNPO1Q92973 898 aaKnown RBP15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 PPP1R16BQ96T49 567 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 TEKT3Q9BXF9 490 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 GINS2Q9Y248 185 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 STK36Q9NRP7 1315 aa15.42■□□□□ 0.06
VPS9D1-204ENST00000565023 IGKV6D-21A0A0A0MT36 114 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 CCDC194A0A1B0GVG4 234 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 MBLAC1A4D2B0 266 aaPredicted RBP15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 EPOPA6NHQ4 379 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 M0QZ92 97 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 HBP1O60381 514 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 GJB5O95377 273 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 KLRC1P26715 233 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 USP11P51784 963 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 MGAT3Q09327 533 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 RABEP1Q15276 862 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 NPY5RQ15761 445 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 LETM2Q2VYF4 491 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 MTHFD1LQ6UB35 978 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 KRT25Q7Z3Z0 450 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 DAGLBQ8NCG7 672 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 IL27Q8NEV9 243 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 OXER1Q8TDS5 423 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 ATP8B4Q8TF62 1192 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 GTF3C6Q969F1 213 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 PCDHA10Q9Y5I2 948 aa15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 COL4A4P53420 1690 aaPredicted RBP15.41■□□□□ 0.06
VPS9D1-204ENST00000565023 M0R2N6 131 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 JAK2O60674 1132 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 ATP4AP20648 1035 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 CD52P31358 61 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 SLC26A2P50443 739 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 LPIN1Q14693 890 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 FBXO47Q5MNV8 452 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 KRT40Q6A162 431 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 PIK3AP1Q6ZUJ8 805 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 RAD9AQ99638 391 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 PHF20Q9BVI0 1012 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 UNC45AQ9H3U1 944 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 DISC1Q9NRI5 854 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 PCDHA2Q9Y5H9 948 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 TRPV2Q9Y5S1 764 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 NCOR1O75376 2440 aa15.4■□□□□ 0.06
VPS9D1-204ENST00000565023 SMIM35A0A1B0GVV1 85 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 WDR64B1ANS9 1081 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 IER5Q5VY09 327 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 MIER3Q7Z3K6 550 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 RPAINQ86UA6 219 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 METTL13Q8N6R0 699 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 WASF1Q92558 559 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 APBB2Q92870 758 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 SLC5A5Q92911 643 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 YME1L1Q96TA2 773 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 AGO3Q9H9G7 860 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 DDX25Q9UHL0 483 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 LIMCH1Q9UPQ0 1083 aa15.39■□□□□ 0.05
VPS9D1-204ENST00000565023 NLRC5Q86WI3 1866 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 LINC01553A4QN01 128 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
VPS9D1-204ENST00000565023 SLC37A4O43826 429 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms