RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 LRRC37AA6NMS7 1700 aa5.3□□□□□ -1.56
SPG11-211ENST00000558561 ZNF804BA4D1E1 1349 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 PTPRCP08575 1304 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 PNMA6EA0A0J9YXQ4 647 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 B2RBV5 119 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 SHOXO15266 292 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 WNT11O96014 354 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 TPP2P29144 1249 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 IGHMBP2P38935 993 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 TIMM10P62072 90 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 NMIQ13287 307 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 SF3A1Q15459 793 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 CLEC16AQ2KHT3 1053 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 DACT2Q5SW24 774 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 XP32Q5T750 250 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 VHLLQ6RSH7 139 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 C6orf15Q6UXA7 325 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 THAP5Q7Z6K1 395 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 VSIG10LQ86VR7 867 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 C16orf71Q8IYS4 520 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 SUPT20HQ8NEM7 779 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 FLCNQ8NFG4 579 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 ASB11Q8WXH4 323 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 MISP3Q96FF7 219 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 FAM84BQ96KN1 310 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 CDC5LQ99459 802 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 MPHOSPH8Q99549 860 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 CHMP4AQ9BY43 222 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 SIL1Q9H173 461 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 CD209Q9NNX6 404 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 ZFP64Q9NPA5 681 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 PAK6Q9NQU5 681 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 CNNM1Q9NRU3 951 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 GPATCH2Q9NW75 528 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 FZD1Q9UP38 647 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 R3HCC1Q9Y3T6 440 aaKnown RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 ZNF451Q9Y4E5 1061 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 ZNF646O15015 1829 aaPredicted RBP5.29□□□□□ -1.56
SPG11-211ENST00000558561 A0A1B0GUL6 1792 aa5.29□□□□□ -1.56
SPG11-211ENST00000558561 XDHP47989 1333 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 ZBED9Q6R2W3 1325 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 PASKQ96RG2 1323 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 SCN4AP35499 1836 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 F8W031 263 aaPredicted RBP5.28□□□□□ -1.56
SPG11-211ENST00000558561 MEIS1O00470 390 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 CBFA2T2O43439 604 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 DDAH1O94760 285 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 PRAMEF1O95521 474 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 EPHX1P07099 455 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 CD247P20963 164 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 ADORA1P30542 326 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 IKZF1Q13422 519 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 FXNQ16595 210 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 CCDC57Q2TAC2 916 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 GAB4Q2WGN9 574 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 ATF7IPQ6VMQ6 1270 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 MOB2Q70IA6 237 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 TSPYL5Q86VY4 417 aaPredicted RBP5.28□□□□□ -1.56
SPG11-211ENST00000558561 FAM178BQ8IXR5 827 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 STK11IPQ8N1F8 1099 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 VGLL2Q8N8G2 317 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 BRF1Q92994 677 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 HAUS7Q99871 368 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 TMX4Q9H1E5 349 aaPredicted RBP5.28□□□□□ -1.56
SPG11-211ENST00000558561 ASCC2Q9H1I8 757 aaPredicted RBP5.28□□□□□ -1.56
SPG11-211ENST00000558561 TRIT1Q9H3H1 467 aaKnown RBP5.28□□□□□ -1.56
SPG11-211ENST00000558561 GP6Q9HCN6 339 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 GFOD1Q9NXC2 390 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 SUSD2Q9UGT4 822 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 PCDHB12Q9Y5F1 795 aa5.28□□□□□ -1.56
SPG11-211ENST00000558561 ADAMTSL1Q8N6G6 1762 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 CEP350Q5VT06 3117 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 ADM5C9JUS6 153 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 EYA2O00167 538 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 SASH1O94885 1247 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 ESR1P03372 595 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 FGFR2P21802 821 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 ZNF445P59923 1031 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 RBL2Q08999 1139 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 RAB33AQ14088 237 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 TNIP1Q15025 636 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 TAF7LQ5H9L4 462 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 ZKSCAN2Q63HK3 967 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 HEATR6Q6AI08 1181 aaKnown RBP5.27□□□□□ -1.57
SPG11-211ENST00000558561 TTLL5Q6EMB2 1281 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 CREG2Q8IUH2 290 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 TP53INP2Q8IXH6 220 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 SIRT2Q8IXJ6 389 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 CKAP2LQ8IYA6 745 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 Q8N3U1 123 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 SMC1BQ8NDV3 1235 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 ENOX1Q8TC92 643 aaKnown RBP5.27□□□□□ -1.57
SPG11-211ENST00000558561 ARHGAP45Q92619 1136 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 PRMT6Q96LA8 375 aaPredicted RBP5.27□□□□□ -1.57
SPG11-211ENST00000558561 FGD4Q96M96 766 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 DRC1Q96MC2 740 aa5.27□□□□□ -1.57
SPG11-211ENST00000558561 EYA3Q99504 573 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms