RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 NAGPAQ9UK23 515 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 FBXL5Q9UKA1 691 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 INTUQ9ULD6 942 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 RGPD3A6NKT7 1758 aaPredicted RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 RGPD4Q7Z3J3 1758 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 E7EVH7 732 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 H0YGN5 161 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 AFPP02771 609 aaKnown RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 UCHL3P15374 230 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 NR2F2P24468 414 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 ECHS1P30084 290 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 UBE2SQ16763 222 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 AGBL2Q5U5Z8 902 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 ALKBH5Q6P6C2 394 aaKnown RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 ADGRF4Q8IZF3 695 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 FGFBP2Q9BYJ0 223 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 SLITRK6Q9H5Y7 841 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 GPCPD1Q9NPB8 672 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 RGS17Q9UGC6 210 aaPredicted RBP16.43■□□□□ 0.22
HERC6-206ENST00000506714 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 NFS1Q9Y697 457 aa16.43■□□□□ 0.22
HERC6-206ENST00000506714 C10orf71Q711Q0 1435 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 GAKO14976 1311 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 SART1O43290 800 aaKnown RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 IL1R1P14778 569 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 CTNNA1P35221 906 aaKnown RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 NPEPPSP55786 919 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 PRR5LQ6MZQ0 368 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 MXD3Q9BW11 206 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 GEMIN8Q9NWZ8 242 aaKnown RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 IGKV6D-41A0A0C4DH26 115 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 TTLL1O95922 423 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 DDR1Q08345 913 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 POTEAQ6S8J7 498 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 SLFN12Q8IYM2 578 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 RASGEF1CQ8N431 466 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
HERC6-206ENST00000506714 SUCLA2Q9P2R7 463 aaPredicted RBP16.42■□□□□ 0.22
HERC6-206ENST00000506714 GMNCA6NCL1 334 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
HERC6-206ENST00000506714 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
HERC6-206ENST00000506714 SEC24CP53992 1094 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 DPY19L2P1Q6NXN4 242 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 C6orf89Q6UWU4 347 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 PEX26Q7Z412 305 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
HERC6-206ENST00000506714 METTL14Q9HCE5 456 aaKnown RBP16.41■□□□□ 0.22
HERC6-206ENST00000506714 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
HERC6-206ENST00000506714 NOC2LQ9Y3T9 749 aaKnown RBP16.41■□□□□ 0.22
HERC6-206ENST00000506714 KRIT1O00522 736 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 ZBTB5O15062 677 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 SERPINB2P05120 415 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 H2AFZP0C0S5 128 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 XRCC5P13010 732 aaKnown RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 PON1P27169 355 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 ACTN3Q08043 901 aaPredicted RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 H2AFVQ71UI9 128 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 CENPHQ9H3R5 247 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 VCPKMTQ9H867 229 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 FAM114A2Q9NRY5 505 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 TMCO5BA8MYB1 307 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 POTECB2RU33 542 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 PDXKO00764 312 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 GFPT2O94808 682 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 SLC9A1P19634 815 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 ATP2B4P23634 1241 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 GABPAQ06546 454 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 ZNF844Q08AG5 666 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 UAP1Q16222 522 aaPredicted RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 SPDYCQ5MJ68 293 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 RNF187Q5TA31 235 aaPredicted RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 ACTR5Q9H9F9 607 aaPredicted RBP16.4■□□□□ 0.22
HERC6-206ENST00000506714 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
HERC6-206ENST00000506714 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms