RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CCT5P48643 541 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 USP11P51784 963 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 SLC12A3P55017 1021 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 PPP4R3CPQ6ZMV5 832 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 RABEP2Q9H5N1 569 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
TSPAN4-211ENST00000468468 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 CASP5P51878 434 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 CNKSR1Q969H4 720 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 INPP4AQ96PE3 977 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 PITPNM2Q9BZ72 1349 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 FRMD3A2A2Y4 597 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 EIF3HO15372 352 aaKnown RBP eCLIP17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 SLC9A1P19634 815 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 SH3BP5LQ7L8J4 393 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 BCAS4Q8TDM0 211 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 TAF4BQ92750 862 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 GRIN2DO15399 1336 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 ARFGEF1Q9Y6D6 1849 aa17.3■□□□□ 0.36
TSPAN4-211ENST00000468468 KRT14P02533 472 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 GUCY2FP51841 1108 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 PTK2Q05397 1052 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 SLFN12Q8IYM2 578 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 SPAG5Q96R06 1193 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 MYCBPQ99417 103 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 SLC26A4O43511 780 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 C21orf2O43822 256 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 GUCY2CP25092 1073 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 PSMC6P62333 389 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 GIT2Q14161 759 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 CDC37Q16543 378 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 KCTD16Q68DU8 428 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 IQCKQ8N0W5 287 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 NCAPGQ9BPX3 1015 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 STK32BQ9NY57 414 aa17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 ARMCX3Q9UH62 379 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-211ENST00000468468 CYP3A7-CYP3A51PA0A087WV96 503 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 MEIS1O00470 390 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 CYP3A7P24462 503 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 SKOR1P84550 965 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 PABPC4Q13310 644 aaKnown RBP eCLIP17.28■□□□□ 0.363e-8■■■■■ 35.6
TSPAN4-211ENST00000468468 ZNF571Q7Z3V5 609 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 SH2D3CQ8N5H7 860 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 RPS6KA1Q15418 735 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 PRR16Q569H4 304 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 KLHL7Q8IXQ5 586 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 EBAG9O00559 213 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 KCNK3O14649 394 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 RAD51CO43502 376 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 UCHL3P15374 230 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 TNNC1P63316 161 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 TRADDQ15628 312 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 KNOP1Q1ED39 458 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 C10orf76Q5T2E6 689 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 SFR1Q86XK3 245 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 MBOAT7Q96N66 472 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
TSPAN4-211ENST00000468468 C10orf71Q711Q0 1435 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 BTNL10A8MVZ5 291 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 ARHGAP4P98171 946 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 DPY19L2P1Q6NXN4 242 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 DNAAF5Q86Y56 855 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 PPM1EQ8WY54 764 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 PLCB1Q9NQ66 1216 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
TSPAN4-211ENST00000468468 ZNF233A6NK53 670 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 MEIS2O14770 477 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 PPIP5K2O43314 1243 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 EFCAB13Q8IY85 973 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 ERMNQ8TAM6 284 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 REEP2Q9BRK0 252 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 IDI2Q9BXS1 227 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 GOLPH3Q9H4A6 298 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 KCNG1Q9UIX4 513 aa17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 BZW2Q9Y6E2 419 aaKnown RBP17.27■□□□□ 0.35
TSPAN4-211ENST00000468468 KIF4AO95239 1232 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 EEF2P13639 858 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 PON1P27169 355 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 ATP1A2P50993 1020 aa17.26■□□□□ 0.35
TSPAN4-211ENST00000468468 SPIRE1Q08AE8 756 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms