RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 RTF1Q92541 710 aaKnown RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC39A13Q96H72 371 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 NUP88Q99567 741 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 RNF32Q9H0A6 362 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 AP5M1Q9H0R1 490 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 WNT8AQ9H1J5 351 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 LUC7LQ9NQ29 371 aaKnown RBP4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 KLHL14Q9P2G3 628 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 GPR160Q9UJ42 338 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 NUDT5Q9UKK9 219 aa4.22□□□□□ -1.73
HMGB1P27-201ENST00000431429 A0A1W2PQ27 194 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 A0A1W2PQ64 194 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 A0A1W2PQC6 194 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 A0A1W2PQD8 194 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZC3H12DA2A288 527 aaKnown RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 HRKO00198 91 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRC1O43663 620 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 MAFO75444 373 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRLP01236 227 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 MMEP08473 750 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 TMEM253P0C7T8 217 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ENPP1P22413 925 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ARL4AP40617 200 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 GALK1P51570 392 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 DBPQ10586 325 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 HLTFQ14527 1009 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 TMEM132BQ14DG7 1078 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 PLCL1Q15111 1095 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZBTB41Q5SVQ8 909 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 RPTNQ6XPR3 784 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 MILR1Q7Z6M3 343 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 CILP2Q8IUL8 1156 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 PHYKPLQ8IUZ5 450 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 FOXB1Q99853 325 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 RXFP1Q9HBX9 757 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 DTLQ9NZJ0 730 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 GABBR1Q9UBS5 961 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 MSRAQ9UJ68 235 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ZNF180Q9UJW8 692 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ANGEL1Q9UNK9 670 aaKnown RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 WASF3Q9UPY6 502 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 LUC7L2Q9Y383 392 aaKnown RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 NOC2LQ9Y3T9 749 aaKnown RBP4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 PPP2R3BQ9Y5P8 575 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 HCFC2Q9Y5Z7 792 aa4.21□□□□□ -1.74
HMGB1P27-201ENST00000431429 ADAM23O75077 832 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 RAC2P15153 192 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 AGXTP21549 392 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 LPOP22079 712 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 SCAND1P57086 179 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 HTRA3P83110 453 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 ALDH6A1Q02252 535 aaKnown RBP4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 LRP8Q14114 963 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 MYBPC3Q14896 1274 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 MLC1Q15049 377 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 CR1LQ2VPA4 569 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 PLEKHN1Q494U1 663 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 FYB2Q5VWT5 728 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 CD276Q5ZPR3 534 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 CYB5RLQ6IPT4 315 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 B3GNT9Q6UX72 402 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 EPM2AIP1Q7L775 607 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 C14orf80Q86SX3 495 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 ABHD4Q8TB40 342 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 JADE3Q92613 823 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 INTS4Q96HW7 963 aaKnown RBP4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 MAML3Q96JK9 1138 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 AIFM3Q96NN9 605 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 GBP4Q96PP9 640 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 PCGF6Q9BYE7 350 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRDM12Q9H4Q4 367 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 RIC8BQ9NVN3 520 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 PLA2G2DQ9UNK4 145 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 ANKRD6Q9Y2G4 727 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 GIT1Q9Y2X7 761 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 IRS2Q9Y4H2 1338 aa4.2□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRAMEF25A6NGN4 478 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 GOLGA8AA7E2F4 631 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 GOLGA8BA8MQT2 603 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 F8W031 263 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 MAP4K4O95819 1239 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 PFKMP08237 780 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 MRPS9P82933 396 aaKnown RBP4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 PRR5P85299 388 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 GRIN1Q05586 938 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 PITRM1Q5JRX3 1037 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 TEPPQ6URK8 271 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 AMIGO3Q86WK7 504 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 IRF2BP1Q8IU81 584 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 TPH2Q8IWU9 490 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 ABI1Q8IZP0 508 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 CPA5Q8WXQ8 436 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 TEKT5Q96M29 485 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 AMNQ9BXJ7 453 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 PITHD1Q9GZP4 211 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 HAPLN2Q9GZV7 340 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 SLC12A5Q9H2X9 1139 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 IP6K2Q9UHH9 426 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 DENND2AQ9ULE3 1009 aa4.19□□□□□ -1.74
HMGB1P27-201ENST00000431429 A0A1W2PQJ5 194 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms