RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 MED4Q9NPJ6 270 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 RGL1Q9NZL6 768 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 RSPH14Q9UHP6 348 aa14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 FEZ2Q9UHY8 353 aaPredicted RBP14.83□□□□□ -0.04
GTF2F1-201ENST00000394456 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 CLIC2O15247 247 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 FGFR1OPO95684 399 aaKnown RBP14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 LEKR1Q6ZMV7 388 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 RPGRIP1Q96KN7 1286 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 NOX5Q96PH1 765 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 ALS2CR12Q96Q35 445 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 TMEM39BQ9GZU3 492 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 TMEM51Q9NW97 253 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 ARHGAP4P98171 946 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 GIT2Q14161 759 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 KIAA0753Q2KHM9 967 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 SLC9C1Q4G0N8 1177 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 KIAA1755Q5JYT7 1200 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 CCDC65Q8IXS2 484 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 ETNPPLQ8TBG4 499 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 LENG9Q96B70 501 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 HDAC9Q9UKV0 1011 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 FAM184BQ9ULE4 1060 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 BCS1LQ9Y276 419 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 CNTNAP1P78357 1384 aa14.82□□□□□ -0.04
GTF2F1-201ENST00000394456 SHTN1A0MZ66 631 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 MYO1CO00159 1063 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 EML1O00423 815 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 TUBBP07437 444 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 BMP3P12645 472 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 UBXN2AP68543 259 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 PTK2Q05397 1052 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 KLHL30Q0D2K2 578 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 ZYXQ15942 572 aaKnown RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 HYIQ5T013 277 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 SYDE2Q5VT97 1194 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 SAMD1Q6SPF0 538 aaPredicted RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 ZNF571Q7Z3V5 609 aaPredicted RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 SH2D3CQ8N5H7 860 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 GMCL1P1Q8NEA9 526 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 RBM46Q8TBY0 533 aaKnown RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 IFT81Q8WYA0 676 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 RUSC1Q9BVN2 902 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 RRP15Q9Y3B9 282 aaKnown RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 GRID2IPA4D2P6 1211 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 OPLAHO14841 1288 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 SERPING1P05155 500 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 GUCY2FP51841 1108 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 DCAF17Q5H9S7 520 aaPredicted RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 PIGOQ8TEQ8 1089 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 GMCL1Q96IK5 515 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 BMP2KQ9NSY1 1161 aaPredicted RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 PPP1R1BQ9UD71 204 aaPredicted RBP14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 NFU1Q9UMS0 254 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 ABCB11O95342 1321 aa14.81□□□□□ -0.04
GTF2F1-201ENST00000394456 SSU72P8A0A1W2PR75 194 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 AKAP3O75969 853 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 TCP1P17987 556 aaKnown RBP14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 KCTD16Q68DU8 428 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 FBXO11Q86XK2 927 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 NIM1KQ8IY84 436 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 KRT12Q99456 494 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 AMNQ9BXJ7 453 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 ACBD3Q9H3P7 528 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 STIM2Q9P246 746 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 RBAK-RBAKDNI3L0D1 243 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 TTMPQ5BVD1 217 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 C8orf74Q6P047 294 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 ZNF572Q7Z3I7 529 aaPredicted RBP14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 SRLQ86TD4 932 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 FAM151AQ8WW52 585 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 BHMT2Q9H2M3 363 aa14.8□□□□□ -0.04
GTF2F1-201ENST00000394456 GUCY2DQ02846 1103 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 NAB2Q15742 525 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 TCERG1LQ5VWI1 586 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 EPB41L5Q9HCM4 733 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 ZNRF3Q9ULT6 936 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 KRT14P02533 472 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 GCFC2P16383 781 aaKnown RBP14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 CXCL9Q07325 125 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 COG2Q14746 738 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 ASIC2Q16515 512 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 SLC18A3Q16572 532 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 IRF2BP2Q7Z5L9 587 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 KLHL7Q8IXQ5 586 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 CRYGNQ8WXF5 182 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 NT5C3AQ9H0P0 336 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 PRR12Q9ULL5 1215 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 COL2A1P02458 1487 aaPredicted RBP14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 KDM3AQ9Y4C1 1321 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 GOLGA6CA6NDK9 693 aa14.79□□□□□ -0.04
GTF2F1-201ENST00000394456 MSH4O15457 936 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms