RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ANKRD65E5RJM6 399 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 RNF40O75150 1001 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 HNRNPH1P31943 449 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 VSNL1P62760 191 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 TNFAIP1Q13829 316 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 WHAMMP3Q1A5X7 153 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 NOC4LQ9BVI4 516 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 SUGCTQ9HAC7 445 aa18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-205ENST00000594973 TTC26A0AVF1 554 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 PRPF6O94906 941 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 KLK7P49862 253 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 MNAT1P51948 309 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 PSMD2Q13200 908 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.61e-9■■■■□ 22.8
SHKBP1-205ENST00000594973 TRIM14Q14142 442 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 CCDC51Q96ER9 411 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 CNOT7Q9UIV1 285 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 HACL1Q9UJ83 578 aa18.81■□□□□ 0.6
SHKBP1-205ENST00000594973 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 CYP3A4P08684 503 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 SPATA31C1P0DKV0 1188 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 CYP11B2P19099 503 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 DNM2P50570 870 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 PRELPP51888 382 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 TBC1D8BQ0IIM8 1120 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 FAM26FQ5R3K3 315 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 WDR18Q9BV38 432 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 MRPL44Q9H9J2 332 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 VAV3Q9UKW4 847 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 LRRIQ3A6PVS8 624 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 CHMP2AO43633 222 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 RPS12P25398 132 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 SLC12A3P55017 1021 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 HERC4Q5GLZ8 1057 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 MYOCDQ8IZQ8 938 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 KAT2BQ92831 832 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 PCMTD1Q96MG8 357 aaPredicted RBP18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 LZTFL1Q9NQ48 299 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 CCPG1Q9ULG6 757 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 DNM3Q9UQ16 869 aa18.8■□□□□ 0.6
SHKBP1-205ENST00000594973 A0A0U1RQJ8 604 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 A0A1W2PQC6 194 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CTAGE15A4D2H0 777 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 PHACTR2O75167 634 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CTAGE8P0CG41 777 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 RPA1P27694 616 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 ERVK-24P63145 666 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 ARSHQ5FYA8 562 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 MIIPQ5JXC2 388 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CTAGE6Q86UF2 777 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CTAGE4Q8IX94 777 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 ATRIPQ8WXE1 791 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 DEFB129Q9H1M3 183 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 ADGRG1Q9Y653 693 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CTAGE9A4FU28 777 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 EML1O00423 815 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 PLA2G6O60733 806 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 SYF2O95926 243 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 MCM3P25205 808 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 PTGER2P43116 358 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 NELFCDQ8IXH7 590 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 CPXCR1Q8N123 301 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 LUC7L2Q9Y383 392 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-205ENST00000594973 EBAG9O00559 213 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 TRIM21P19474 475 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 NBPF12Q5TAG4 269 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 PRAMEF18Q5VWM3 479 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 TANGO6Q9C0B7 1094 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 SATB1Q01826 763 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 LRCH2Q5VUJ6 765 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 TMTC1Q8IUR5 882 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 CNPY4Q8N129 248 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 CEP120Q8N960 986 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 ACRBPQ8NEB7 543 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 HOOK2Q96ED9 719 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 TSG101Q99816 390 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 IRX2Q9BZI1 471 aaPredicted RBP18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 POLD4Q9HCU8 107 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 HOMER2Q9NSB8 354 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 ABCB11O95342 1321 aa18.78■□□□□ 0.6
SHKBP1-205ENST00000594973 SETQ01105 290 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 MAP9Q49MG5 647 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 CYP26C1Q6V0L0 522 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 CHP1Q99653 195 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 SLF1Q9BQI6 1058 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 FZD1Q9UP38 647 aa18.77■□□□□ 0.6
SHKBP1-205ENST00000594973 ICAM1P05362 532 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 RHOXF2BP0C7M4 288 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 MTMR2Q13614 643 aa18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 CTTNQ14247 550 aaKnown RBP18.77■□□□□ 0.59
SHKBP1-205ENST00000594973 CEP55Q53EZ4 464 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms