RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 MANSC4A6NHS7 340 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 PEX10O60683 326 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 PMS1P54277 932 aaKnown RBP17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 AP3B2Q13367 1082 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 MUM1L1Q5H9M0 696 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 TEX2Q8IWB9 1127 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 TBCKQ8TEA7 893 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 ATRIPQ8WXE1 791 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 HHIPL1Q96JK4 782 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 PTPN18Q99952 460 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 RNF146Q9NTX7 359 aa17.8■□□□□ 0.44
SQSTM1-213ENST00000510187 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 FIGNQ5HY92 759 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 MCTP2Q6DN12 878 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 CNNM4Q6P4Q7 775 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 PAXIP1Q6ZW49 1069 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 CSGALNACT2Q8N6G5 542 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 EHBP1Q8NDI1 1231 aa17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 DUSP9Q99956 384 aaKnown RBP17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 COL11A1P12107 1806 aaPredicted RBP17.79■□□□□ 0.44
SQSTM1-213ENST00000510187 FAM155AB1AL88 458 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CCNT1O60563 726 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 ERLIN1O75477 346 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 FOSP01100 380 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 KRT83P78385 493 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 AMPD2Q01433 879 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 LETM2Q2VYF4 491 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 TKFCQ3LXA3 575 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 LRRC15Q8TF66 581 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 FUT8Q9BYC5 575 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 TTYH3Q9C0H2 523 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 ST7Q9NRC1 585 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 STK17AQ9UEE5 414 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 A0A1W2PQJ5 194 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CTAGE15A4D2H0 777 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CNMDO75829 334 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 SASH3O75995 380 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CTAGE8P0CG41 777 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CDK17Q00537 523 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 PDE4DQ08499 809 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 GRM1Q13255 1194 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 LONRF2Q1L5Z9 754 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CTAGE6Q86UF2 777 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CTAGE4Q8IX94 777 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CCDC170Q8IYT3 715 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 GTF3C2Q8WUA4 911 aaPredicted RBP17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 CALML4Q96GE6 196 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 TUBGCP2Q9BSJ2 902 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 EPC1Q9H2F5 836 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 ANKZF1Q9H8Y5 726 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 TXNRD2Q9NNW7 524 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 RBPJLQ9UBG7 517 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 REXO2Q9Y3B8 237 aaKnown RBP17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
SQSTM1-213ENST00000510187 A0A0G2JMZ2 1700 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 CYLC1P35663 651 aaPredicted RBP17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 FXR2P51116 673 aaKnown RBP eCLIP17.77■□□□□ 0.442e-7■■□□□ 14
SQSTM1-213ENST00000510187 HSD17B4P51659 736 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 ASIC1P78348 528 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 RIOX2Q8IUF8 465 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 ACAD9Q9H845 621 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 ZNHIT6Q9NWK9 470 aaKnown RBP17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 MYO6Q9UM54 1294 aa17.77■□□□□ 0.44
SQSTM1-213ENST00000510187 CCDC66A2RUB6 948 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 MAP2K7O14733 419 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 APLP1P51693 650 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 ZBED6P86452 979 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 FOXR2Q6PJQ5 311 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 NSMFQ6X4W1 530 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 RNF207Q6ZRF8 634 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 CNOT6LQ96LI5 555 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 ERGIC2Q96RQ1 377 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 CHP1Q99653 195 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 CREBZFQ9NS37 354 aa17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 MAP3K20Q9NYL2 800 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 PUF60Q9UHX1 559 aaKnown RBP17.76■□□□□ 0.43
SQSTM1-213ENST00000510187 PVALEFA0A1B0GWK0 134 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 B4DLN1 442 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 INHBEP58166 350 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 RPS6P62753 249 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 GHRHRQ02643 423 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 CYP4F22Q6NT55 531 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 NCAPG2Q86XI2 1143 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 MTMR9Q96QG7 549 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 PLIN2Q99541 437 aa17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 MMTAG2Q9BU76 263 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
SQSTM1-213ENST00000510187 IGF2BP3O00425 579 aaKnown RBP eCLIP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms