RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PLEKHG4Q58EX7 1191 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 POTEHQ6S545 545 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 RUFY3Q7L099 469 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 MYOCDQ8IZQ8 938 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 FAM217BQ9NTX9 383 aaPredicted RBP11.86□□□□□ -0.51
NR1I3-222ENST00000506018 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 TUBE1Q9UJT0 475 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 INSL6Q9Y581 213 aa11.86□□□□□ -0.51
NR1I3-222ENST00000506018 LOXHD1Q8IVV2 1947 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 M0QZ92 97 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 MEIS1O00470 390 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 STAT5BP51692 787 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 ACTR2P61160 394 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 ADAM17P78536 824 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 DEFB103AP81534 67 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 TAP1Q03518 808 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 ADGRE1Q14246 886 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 MBTPS1Q14703 1052 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 CCDC85BQ15834 202 aaPredicted RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 TJAP1Q5JTD0 557 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 FAM26DQ5JW98 314 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 PLPPR4Q7Z2D5 763 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 ATXN2LQ8WWM7 1075 aaKnown RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 SLC26A6Q9BXS9 759 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 IFIH1Q9BYX4 1025 aaKnown RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 AGO4Q9HCK5 861 aaKnown RBP11.85□□□□□ -0.51
NR1I3-222ENST00000506018 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 EYSQ5T1H1 3165 aa11.85□□□□□ -0.51
NR1I3-222ENST00000506018 PRRC2BQ5JSZ5 2229 aaKnown RBP11.84□□□□□ -0.51
NR1I3-222ENST00000506018 NLRC5Q86WI3 1866 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 BACH1O14867 736 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 CYP3A4P08684 503 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 ARP10275 920 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 IFNAR1P17181 557 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-222ENST00000506018 IGBP1P78318 339 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 SKIV2LQ15477 1246 aaKnown RBP11.84□□□□□ -0.51
NR1I3-222ENST00000506018 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 IER5Q5VY09 327 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 MIS18BP1Q6P0N0 1132 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 FAM117BQ6P1L5 589 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 PHKBQ93100 1093 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 ZNF577Q9BSK1 485 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 C22orf23Q9BZE7 217 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 SH3GLB2Q9NR46 395 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 WDR81Q562E7 1941 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 EVPLQ92817 2033 aa11.84□□□□□ -0.51
NR1I3-222ENST00000506018 COL4A4P53420 1690 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-222ENST00000506018 MBLAC1A4D2B0 266 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 DDX39AO00148 427 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 INSRRP14616 1297 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 EVCP57679 992 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 CCT2P78371 535 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 MRPS5P82675 430 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 ZNF274Q96GC6 653 aaPredicted RBP11.83□□□□□ -0.52
NR1I3-222ENST00000506018 SAMD11Q96NU1 681 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 LMCD1Q9NZU5 365 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 TELO2Q9Y4R8 837 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 CHD9Q3L8U1 2897 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 PRUNE2Q8WUY3 3088 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 RALGAPA2Q2PPJ7 1873 aa11.83□□□□□ -0.52
NR1I3-222ENST00000506018 POTEB3A0JP26 581 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 HBP1O60381 514 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 CDKL5O76039 1030 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 ATG7O95352 703 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 DEXIO95424 95 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 NUBP1P53384 320 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 NLRP5P59047 1200 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 MRPS6P82932 125 aaKnown RBP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 PLCB4Q15147 1175 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 PKN1Q16512 942 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 POTEBQ6S5H4 581 aa11.82□□□□□ -0.52
NR1I3-222ENST00000506018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 FAM43BQ6ZT52 329 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 TMCO2Q7Z6W1 182 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 SMAP1Q8IYB5 467 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-222ENST00000506018 FAM177A1Q8N128 213 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms