RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MTHFD1P11586 935 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 POU3F2P20265 443 aaPredicted RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 XPAP23025 273 aaPredicted RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 KRT9P35527 623 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 BTKQ06187 659 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 PRR16Q569H4 304 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 CYP26C1Q6V0L0 522 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 RTL10Q7L3V2 364 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 MCM10Q7L590 875 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 CHST15Q7LFX5 561 aaPredicted RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 AGGF1Q8N302 714 aaeCLIP6.85□□□□□ -1.31
RTF1-203ENST00000473214 GLIS3Q8NEA6 775 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 OR2W6PQ8NHA6 318 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 DEPTORQ8TB45 409 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 UBXN10Q96LJ8 280 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 NSUN5Q96P11 429 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 RMDN3Q96TC7 470 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 MTFR1LQ9H019 292 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 LMAN2LQ9H0V9 348 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 EHD4Q9H223 541 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 BRD9Q9H8M2 597 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 PDLIM7Q9NR12 457 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 ATP8A2Q9NTI2 1148 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 PTPN22Q9Y2R2 807 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 TNPO3Q9Y5L0 923 aaKnown RBP6.85□□□□□ -1.31
RTF1-203ENST00000473214 SNCAIPQ9Y6H5 919 aa6.85□□□□□ -1.31
RTF1-203ENST00000473214 PTPRKQ15262 1439 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 ZMYM3Q14202 1370 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 DNMT1P26358 1616 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 H0Y3Z8 333 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 H3BRJ5 948 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 AREL1O15033 823 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 MAFKO60675 156 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 TOM1O60784 492 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 IGLV1-40P01703 118 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 MYBP10242 640 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 BPIP17213 487 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 RPL17P18621 184 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 VCAM1P19320 739 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 SMARCA1P28370 1054 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 ELF1P32519 619 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 HPDP32754 393 aaPredicted RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 TM4SF4P48230 202 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 TNFAIP2Q03169 654 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 AP3B2Q13367 1082 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 SLMAPQ14BN4 828 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 NCAPHQ15003 741 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 IFIT1BQ5T764 474 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 CCDC30Q5VVM6 783 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 TTBK2Q6IQ55 1244 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 VHLLQ6RSH7 139 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 BTN2A1Q7KYR7 527 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 CATSPER4Q7RTX7 472 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.84□□□□□ -1.31
RTF1-203ENST00000473214 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 CMTR1Q8N1G2 835 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 FAM43AQ8N2R8 423 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 MSANTD4Q8NCY6 345 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 MGARPQ8TDB4 240 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 FERMT2Q96AC1 680 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 UBL7Q96S82 380 aaPredicted RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 TBCBQ99426 244 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 GTPBP4Q9BZE4 634 aaKnown RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 EPN3Q9H201 632 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 IFT80Q9P2H3 777 aaPredicted RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 STAP2Q9UGK3 403 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 CPS1P31327 1500 aa6.84□□□□□ -1.31
RTF1-203ENST00000473214 POLR1AO95602 1720 aaPredicted RBP6.84□□□□□ -1.31
RTF1-203ENST00000473214 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 A6NNZ2 444 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 M0R2C6 588 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 AGRPO00253 132 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 AP1G1O43747 822 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 ADAMTS4O75173 837 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 TGFB1P01137 390 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 GLB1P16278 677 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 MPP2Q14168 576 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 ZNF460Q14592 562 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 TAF12Q16514 161 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 CDCA2Q69YH5 1023 aaPredicted RBP6.83□□□□□ -1.32
RTF1-203ENST00000473214 DTHD1Q6ZMT9 781 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 AGMOQ6ZNB7 445 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 ENOSF1Q7L5Y1 443 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 CMTR2Q8IYT2 770 aaKnown RBP6.83□□□□□ -1.32
RTF1-203ENST00000473214 CEP57L1Q8IYX8 460 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 OR8H1Q8NGG4 311 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 NUP88Q99567 741 aaPredicted RBP6.83□□□□□ -1.32
RTF1-203ENST00000473214 CHCHD6Q9BRQ6 235 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 VPS11Q9H270 941 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 DIAPH3Q9NSV4 1193 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 STOML1Q9UBI4 398 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 GIMAP2Q9UG22 337 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
RTF1-203ENST00000473214 PA2G4Q9UQ80 394 aaKnown RBP6.83□□□□□ -1.32
RTF1-203ENST00000473214 RRP15Q9Y3B9 282 aaKnown RBP6.83□□□□□ -1.32
RTF1-203ENST00000473214 PCDHGB6Q9Y5F9 930 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms