RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	RBM17	Q96I25	401 aa	Known RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	RMDN2	Q96LZ7	410 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	SEC62	Q99442	399 aa	Known RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	REPIN1	Q9BWE0	567 aa	Known RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	DBR1	Q9UK59	544 aa	Known RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	GTF2A1L	Q9UNN4	478 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	TMEM98	Q9Y2Y6	226 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZBTB24	O43167	697 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	GDI1	P31150	447 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	BCAP31	P51572	246 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	NNT	Q13423	1086 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	CBX2	Q14781	532 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	TAF1B	Q53T94	588 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	PPP1R21	Q6ZMI0	780 aa		4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	CHERP	Q8IWX8	916 aa	Known RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.06	□□□□□ -1.76
PCDH15-208	ENST00000395432	CCDC78	A2IDD5	438 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TRIM38	O00635	465 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PSIP1	O75475	530 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PRIM2	P49643	509 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RPS8	P62241	208 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MTMR2	Q13614	643 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TSHZ3	Q63HK5	1081 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RUFY4	Q6ZNE9	571 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CATSPER4	Q7RTX7	472 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TMEM57	Q8N5G2	664 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ANKS4B	Q8N8V4	417 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	EHBP1	Q8NDI1	1231 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PIP4K2C	Q8TBX8	421 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NDRG1	Q92597	394 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DPH2	Q9BQC3	489 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MXD3	Q9BW11	206 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZNF408	Q9H9D4	720 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	UBTD1	Q9HAC8	227 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RASAL1	O95294	804 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ATP6V1C1	P21283	382 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	POU1F1	P28069	291 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	LTK	P29376	864 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ARL3	P36405	182 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	HSD17B7	P56937	341 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RUNX2	Q13950	521 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DSG2	Q14126	1118 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	FSCB	Q5H9T9	825 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TOR1AIP1	Q5JTV8	583 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SARM1	Q6SZW1	724 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NDUFAF2	Q8N183	169 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NXPE1	Q8N323	547 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PI4K2B	Q8TCG2	481 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DDX17	Q92841	729 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ELMO3	Q96BJ8	720 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SAT2	Q96F10	170 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CEP19	Q96LK0	163 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SLC26A8	Q96RN1	970 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SMC6	Q96SB8	1091 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PKP4	Q99569	1192 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MYD88	Q99836	296 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	USP26	Q9BXU7	913 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	IQCG	Q9H095	443 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CATSPERZ	Q9NTU4	200 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ORC3	Q9UBD5	711 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SLC8A2	Q9UPR5	921 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZNF644	Q9H582	1327 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	FAM47DP	A6NHR8	397 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PER1	O15534	1290 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SRGAP2B	P0DMP2	458 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	KCNA2	P16389	499 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DNASE1	P24855	282 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MCM5	P33992	734 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MTHFR	P42898	656 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	OLR1	P78380	273 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	EXOSC9	Q06265	439 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DHX9	Q08211	1270 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CWF19L2	Q2TBE0	894 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CCDC93	Q567U6	631 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SH3D19	Q5HYK7	790 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	THOC7	Q6I9Y2	204 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ILDR2	Q71H61	639 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	NLRP9	Q7RTR0	991 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CEP112	Q8N8E3	955 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	INPP5D	Q92835	1189 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	DACT3	Q96B18	629 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	KCNK17	Q96T54	332 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	IER2	Q9BTL4	223 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ZWILCH	Q9H900	591 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ARHGEF10L	Q9HCE6	1279 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CDV3	Q9UKY7	258 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	SGK1	O00141	431 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TNPO2	O14787	897 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CASC3	O15234	703 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	RASA4	O43374	803 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	MGEA5	O60502	916 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	GUCA1C	O95843	209 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PLCG2	P16885	1265 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CAST	P20810	708 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	PAN2	Q504Q3	1202 aa	Known RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	ODF2	Q5BJF6	829 aa		4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.05	□□□□□ -1.76
PCDH15-208	ENST00000395432	CATIP	Q7Z7H3	387 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms