RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 FAM114A1Q8IWE2 563 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 NOC3LQ8WTT2 800 aaKnown RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 ATRIPQ8WXE1 791 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 CRYGNQ8WXF5 182 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 AGBL1Q96MI9 1066 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 DUSP9Q99956 384 aaKnown RBP15.67■□□□□ 0.1
LIMD1-202ENST00000440097 ABCB6Q9NP58 842 aa15.67■□□□□ 0.1
LIMD1-202ENST00000440097 NPHP3-ACAD11A0A0J9YXS1 232 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 PHF20L1A8MW92 1017 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 B4DLN1 442 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 CCDC175P0C221 793 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 MMP14P50281 582 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIMD1-202ENST00000440097 NBPF12Q5TAG4 269 aaPredicted RBP15.66■□□□□ 0.1
LIMD1-202ENST00000440097 SLC30A10Q6XR72 485 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 CATSPER3Q86XQ3 398 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 LENG9Q96B70 501 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 FAM20AQ96MK3 541 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 TEPSINQ96N21 525 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 PGAP2Q9UHJ9 254 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 TBX3O15119 743 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 MFAP3LO75121 409 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 HERC4Q5GLZ8 1057 aaPredicted RBP15.66■□□□□ 0.1
LIMD1-202ENST00000440097 GLIS3Q8NEA6 775 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 EHMT1Q9H9B1 1298 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 RAB21Q9UL25 225 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 DNM3Q9UQ16 869 aa15.66■□□□□ 0.1
LIMD1-202ENST00000440097 EIF3JO75822 258 aaKnown RBP15.65■□□□□ 0.1
LIMD1-202ENST00000440097 FLOT1O75955 427 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 COASYQ13057 564 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 MTMR2Q13614 643 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 GOLGA6L1Q8N7Z2 621 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 HOOK2Q96ED9 719 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 PANX2Q96RD6 677 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 SEMA6BQ9H3T3 888 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 CDC23Q9UJX2 597 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 L1RE1Q9UN81 338 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 FZD1Q9UP38 647 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 FER1L6Q2WGJ9 1857 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 LGALS16A8MUM7 142 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 FAM26FQ5R3K3 315 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 CEP112Q8N8E3 955 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
LIMD1-202ENST00000440097 MSANTD4Q8NCY6 345 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
LIMD1-202ENST00000440097 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
LIMD1-202ENST00000440097 ERLIN1O75477 346 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ALAS1P13196 640 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 KRT9P35527 623 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 TBC1D8BQ0IIM8 1120 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ANGEL2Q5VTE6 544 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 LRCH2Q5VUJ6 765 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ITIH6Q6UXX5 1313 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 TFRCP02786 760 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 RHOXF2BP0C7M4 288 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 CIITAP33076 1130 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 PSMC6P62333 389 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 RAD9BQ6WBX8 426 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 MYOCDQ8IZQ8 938 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 MB21D1Q8N884 522 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 TSG101Q99816 390 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 RHOXF2Q9BQY4 288 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ABCB11O95342 1321 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ZNF541Q9H0D2 1346 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 WDR46O15213 610 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 TRIM21P19474 475 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 PRELPP51888 382 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 MAP3K10Q02779 954 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 SPIRE1Q08AE8 756 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 SPP2Q13103 211 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 PSMD2Q13200 908 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.09
LIMD1-202ENST00000440097 HYIQ5T013 277 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 DNAJC19Q96DA6 116 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 RGL1Q9NZL6 768 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 PKD2L1Q9P0L9 805 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 ADGRG1Q9Y653 693 aa15.64■□□□□ 0.09
LIMD1-202ENST00000440097 FZD9O00144 591 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 KIF5CO60282 957 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 GAS7O60861 476 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 PHACTR2O75167 634 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 RPA1P27694 616 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 TRIM14Q14142 442 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ZNF569Q5MCW4 686 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 CENPPQ6IPU0 288 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 LPAR1Q92633 364 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ZKSCAN4Q969J2 545 aaPredicted RBP15.63■□□□□ 0.09
LIMD1-202ENST00000440097 CCDC102AQ96A19 550 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 WRNIP1Q96S55 665 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 RAVER2Q9HCJ3 691 aaKnown RBP15.63■□□□□ 0.09
LIMD1-202ENST00000440097 ICAM1P05362 532 aa15.63■□□□□ 0.09
LIMD1-202ENST00000440097 CYP3A4P08684 503 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms