RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 A6NHS1 94 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 MINDY4BA8MYZ0 360 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 CHN1P15882 459 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 CDC25CP30307 473 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 SPDYCQ5MJ68 293 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 SLC30A9Q6PML9 568 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 ACTRT1Q8TDG2 376 aa26.59■■□□□ 1.85
SOX1-201ENST00000330949 WTIPA6NIX2 430 aaPredicted RBP26.58■■□□□ 1.85
SOX1-201ENST00000330949 SERPING1P05155 500 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 FLT3P36888 993 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 ZNF131P52739 623 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 THEMIS2Q5TEJ8 643 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 LCORLQ8N3X6 602 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 FGFR1OPO95684 399 aaKnown RBP26.58■■□□□ 1.85
SOX1-201ENST00000330949 DHX9Q08211 1270 aaKnown RBP26.58■■□□□ 1.85
SOX1-201ENST00000330949 COBLL1Q53SF7 1204 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 ENAHQ8N8S7 591 aaPredicted RBP26.58■■□□□ 1.85
SOX1-201ENST00000330949 PLA2G12BQ9BX93 195 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 PNMA2Q9UL42 364 aa26.58■■□□□ 1.85
SOX1-201ENST00000330949 CCDC188H7C350 402 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 RAB27AP51159 221 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ALDH5A1P51649 535 aaPredicted RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 RPS6KA3P51812 740 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 IFIT1BQ5T764 474 aaKnown RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 TMTC3Q6ZXV5 915 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 SYN2Q92777 582 aaPredicted RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 ZFATQ9P243 1243 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ABCF2Q9UG63 623 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 CCNG1P51959 295 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 CNNM4Q6P4Q7 775 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 TEX9Q8N6V9 391 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 TRIM9Q9C026 710 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 AGAP1Q9UPQ3 857 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 TOGARAM1Q9Y4F4 1720 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 PNPLA7Q6ZV29 1317 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 PP2D1A8MPX8 630 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ATP2A2P16615 1042 aaKnown RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 KCNJ2P63252 427 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 PDCD2Q16342 344 aaPredicted RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 ANKRD20A2Q5SQ80 823 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ANKRD20A1Q5TYW2 823 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ANKRD20A3Q5VUR7 823 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 SDR42E1Q8WUS8 393 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ATXN2LQ8WWM7 1075 aaKnown RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 ANKS1AQ92625 1134 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ZSCAN10Q96SZ4 725 aaPredicted RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 PLIN2Q99541 437 aa26.57■■□□□ 1.84
SOX1-201ENST00000330949 ELAC2Q9BQ52 826 aaKnown RBP26.57■■□□□ 1.84
SOX1-201ENST00000330949 LINGO3P0C6S8 592 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 ASIC1P78348 528 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 LRRC34Q8IZ02 419 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 CNTNAP5Q8WYK1 1306 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 PGRMC1O00264 195 aaKnown RBP26.56■■□□□ 1.84
SOX1-201ENST00000330949 DAPK3O43293 454 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 PDE8AO60658 829 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 CYP19A1P11511 503 aaPredicted RBP26.56■■□□□ 1.84
SOX1-201ENST00000330949 SCG2P13521 617 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 NCALDP61601 193 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 PUM3Q15397 648 aaKnown RBP26.56■■□□□ 1.84
SOX1-201ENST00000330949 KIAA0753Q2KHM9 967 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 SFMBT2Q5VUG0 894 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 CENPPQ6IPU0 288 aa26.56■■□□□ 1.84
SOX1-201ENST00000330949 GBP7Q8N8V2 638 aaPredicted RBP26.56■■□□□ 1.84
SOX1-201ENST00000330949 MYH1P12882 1939 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 SHANK3Q9BYB0 1731 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 STXBP3O00186 592 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 FERP16591 822 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 MMP13P45452 471 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 SLC18A3Q16572 532 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 FAM114A2Q9NRY5 505 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 CEP104O60308 925 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 FCER1AP12319 257 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 SELENOSQ9BQE4 189 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 SEMA6BQ9H3T3 888 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 SLITRK6Q9H5Y7 841 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 CCDC134Q9H6E4 229 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 LRP2BPQ9P2M1 347 aa26.55■■□□□ 1.84
SOX1-201ENST00000330949 KIF4AO95239 1232 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 RARAP10276 462 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 CALML3P27482 149 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 TROAPQ12815 778 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 MFN1Q8IWA4 741 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 ITFG2Q969R8 447 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 ABCF3Q9NUQ8 709 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 CAND2O75155 1236 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 USP11P51784 963 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 IFT74Q96LB3 600 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 C7orf25Q9BPX7 421 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 DDX47Q9H0S4 455 aaKnown RBP26.54■■□□□ 1.84
SOX1-201ENST00000330949 ECT2Q9H8V3 914 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 CEP72Q9P209 647 aa26.54■■□□□ 1.84
SOX1-201ENST00000330949 DDAH1O94760 285 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 UBOX5O94941 541 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 KIF5BP33176 963 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 ERICH1Q86X53 443 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 SEC14L1Q92503 715 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 OSBPL1AQ9BXW6 950 aa26.53■■□□□ 1.84
SOX1-201ENST00000330949 IGF2BP3O00425 579 aaKnown RBP eCLIP26.53■■□□□ 1.84
SOX1-201ENST00000330949 PAPOLAP51003 745 aaKnown RBP26.53■■□□□ 1.84
SOX1-201ENST00000330949 LACTBP83111 547 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms