RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 QTRT2Q9H974 415 aaKnown RBP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SRGAP2O75044 1071 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SRGAP2BP0DMP2 458 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PTPREP23469 700 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 STX1BP61266 288 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CDC37Q16543 378 aaPredicted RBP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 Q9H521 79 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GOLGA8MH3BSY2 632 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ACSL3O95573 720 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 BMP3P12645 472 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CDC25BP30305 580 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MAN2A1Q16706 1144 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 BANK1Q8NDB2 785 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 HIPK4Q8NE63 616 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CYP2D6P10635 497 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SOX5P35711 763 aa14.67□□□□□ -0.06
CHRFAM7A-201ENST00000299847 APOEP02649 317 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GNL1P36915 607 aaPredicted RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 NSUN2Q08J23 767 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 NNTQ13423 1086 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TRMT10CQ7L0Y3 403 aaKnown RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GSPT2Q8IYD1 628 aaKnown RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 DHTKD1Q96HY7 919 aaPredicted RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FAM49AQ9H0Q0 323 aaPredicted RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PI4K2BG5E9Z4 385 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 BBS9Q3SYG4 887 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PRPF38AQ8NAV1 312 aaKnown RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GSDMAQ96QA5 445 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PGRMC1O00264 195 aaKnown RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SLMAPQ14BN4 828 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ANGPTL8Q6UXH0 198 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RNF26Q9BY78 433 aaPredicted RBP14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TRIM4Q9C037 500 aa14.66□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MT-ND3P03897 115 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KITP10721 976 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ZSCAN20P17040 1043 aaPredicted RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MCTP2Q6DN12 878 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TDRD7Q8NHU6 1098 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MIS12Q9H081 205 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CTNND1O60716 968 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MYL3P08590 195 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ATP1A3P13637 1013 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CYTH2Q99418 400 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CPSF3Q9UKF6 684 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TRIM49BA6NDI0 452 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FOSP01100 380 aaPredicted RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 GAP43P17677 238 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ARL4AP40617 200 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PPP2R5EQ16537 467 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 KIAA1841Q6NSI8 718 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 LINC00301Q8NCQ3 95 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MTRQ99707 1265 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 MED4Q9NPJ6 270 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 ANKRD65E5RJM6 399 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SEMA3EO15041 775 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PRPSAP2O60256 369 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 EPHB4P54760 987 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TOGARAM2Q6ZUX3 1019 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PARD6BQ9BYG5 372 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 TYW5A2RUC4 315 aaKnown RBP14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CIAO1O76071 339 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 PEX3P56589 373 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CDR2Q01850 454 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 SIX6OS1Q8N1H7 587 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 RWDD2AQ9UIY3 292 aa14.65□□□□□ -0.06
CHRFAM7A-201ENST00000299847 CCDC195A0A1B0GUA6 201 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 BPIFB4P59827 614 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 YWHAHQ04917 246 aaPredicted RBP14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TMEM259Q4ZIN3 620 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PCGF5Q86SE9 256 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CNKSR1Q969H4 720 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 HEMGNQ9BXL5 484 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 LRRC4Q9HBW1 653 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 POLR3EQ9NVU0 708 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 POLIQ9UNA4 740 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RRP15Q9Y3B9 282 aaKnown RBP14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NMT2O60551 498 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RSBN1LQ6PCB5 846 aaPredicted RBP14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 HAUS8Q9BT25 410 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 A0A1W2PQ27 194 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 A0A1W2PQ64 194 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 A0A1W2PQD8 194 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NACC1Q96RE7 527 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MSTO1Q9BUK6 570 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 LAD1O00515 517 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 DR1Q01658 176 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TLK1Q9UKI8 766 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ATP10AO60312 1499 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EEF1B2P24534 225 aaKnown RBP14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANO4Q32M45 955 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms