RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 KDM3AQ9Y4C1 1321 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 PVALEFA0A1B0GWK0 134 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 RCCD1A6NED2 376 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 PEX10O60683 326 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 ZMYND10O75800 440 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 ACTN1P12814 892 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNA3P22001 575 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 POLD1P28340 1107 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 CAP2P40123 477 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNJ6P48051 423 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 CYP2J2P51589 502 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 RNASE9P60153 205 aaKnown RBP6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 FKBP3Q00688 224 aaKnown RBP6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 AP3B2Q13367 1082 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 MTMR2Q13614 643 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 TRIM14Q14142 442 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 TMEM119Q4V9L6 283 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 UTP14CQ5TAP6 766 aaKnown RBP6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 SCFD1Q8WVM8 642 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 JAKMIP2Q96AA8 810 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 MTMR8Q96EF0 704 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 KCNMB3Q9NPA1 279 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 TMX2Q9Y320 296 aa6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 REXO2Q9Y3B8 237 aaKnown RBP6.69□□□□□ -1.34
TNFSF4-201ENST00000281834 TESPA1A2RU30 521 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 POLR3GO15318 223 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 PNMA6AP0CW24 399 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 CYLC1P35663 651 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 EIF4A3P38919 411 aaKnown RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 MAN2A1Q16706 1144 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 NBPF12Q5TAG4 269 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 GMCL1P1Q8NEA9 526 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 ETNPPLQ8TBG4 499 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 LENG9Q96B70 501 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 CCDC51Q96ER9 411 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 NAPGQ99747 312 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 LRRC27Q9C0I9 530 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 GLT8D2Q9H1C3 349 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 MLXIPQ9HAP2 919 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 CAPN11Q9UMQ6 739 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 COL4A3BPQ9Y5P4 624 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 ITIH6Q6UXX5 1313 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 TADA3O75528 432 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 ECM2O94769 699 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 FOSP01100 380 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 ASNSP08243 561 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 SPATA31C1P0DKV0 1188 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 SREBF1P36956 1147 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 CASP4P49662 377 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 GMPSP49915 693 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 GFPT1Q06210 699 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 GRIPAP1Q4V328 841 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 IFIH1Q9BYX4 1025 aaKnown RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 MRFAP1Q9Y605 127 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 COL11A2P13942 1736 aaPredicted RBP6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 MYH8P13535 1937 aa6.68□□□□□ -1.34
TNFSF4-201ENST00000281834 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 CETN3O15182 167 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ZNF185O15231 689 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 FGFR1OPO95684 399 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ATP1A1P05023 1023 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 HERVK_113P62684 666 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ZBED6P86452 979 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 KIF5AQ12840 1032 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SYCP3Q8IZU3 236 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 FAM133AQ8N9E0 248 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 CDK5RAP2Q96SN8 1893 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 MRIQ9BWK5 157 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ARGLU1Q9NWB6 273 aaPredicted RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SMARCAL1Q9NZC9 954 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 CNTNAP1P78357 1384 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 IPO5O00410 1097 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ARHGAP25P42331 645 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 MAP3K9P80192 1104 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 COG2Q14746 738 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 CEP55Q53EZ4 464 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 LRRC55Q6ZSA7 311 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SPAG5Q96R06 1193 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 GMLQ99445 158 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 DEFB129Q9H1M3 183 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 PCIF1Q9H4Z3 704 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SUGCTQ9HAC7 445 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SEPT11Q9NVA2 429 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 CNOT7Q9UIV1 285 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 MRPL11Q9Y3B7 192 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 DLEC1Q9Y238 1755 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 A0A1W2PQC6 194 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 ZBTB22O15209 634 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 KRT86O43790 486 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 USO1O60763 962 aaKnown RBP6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 MOCS3O95396 460 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SLC9A1P19634 815 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 RPA1P27694 616 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 KIF11P52732 1056 aa6.67□□□□□ -1.34
TNFSF4-201ENST00000281834 SLC12A3P55017 1021 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms