RNA–Protein interactions for RNA: ENST00000610543.4

CNTFR-204, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNTFR, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-204ENST00000610543 SRGAP1Q7Z6B7 1085 aa16.9■□□□□ 0.3
CNTFR-204ENST00000610543 LENG9Q96B70 501 aa16.9■□□□□ 0.3
CNTFR-204ENST00000610543 GMLQ99445 158 aa16.9■□□□□ 0.3
CNTFR-204ENST00000610543 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
CNTFR-204ENST00000610543 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
CNTFR-204ENST00000610543 SIK3Q9Y2K2 1263 aa16.9■□□□□ 0.3
CNTFR-204ENST00000610543 KIF13BQ9NQT8 1826 aa16.89■□□□□ 0.3
CNTFR-204ENST00000610543 FRMD3A2A2Y4 597 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 POTEFA5A3E0 1075 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 FAM86B1E9PN63 330 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 TRAF5O00463 557 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 FAM86B2P0C5J1 330 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 ECE1P42892 770 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 CLCN6P51797 869 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 POTEEQ6S8J3 1075 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 TMCO3Q6UWJ1 677 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 P2RX7Q99572 595 aaKnown RBP16.89■□□□□ 0.29
CNTFR-204ENST00000610543 TANGO6Q9C0B7 1094 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 GUCA1BQ9UMX6 200 aa16.89■□□□□ 0.29
CNTFR-204ENST00000610543 REXO2Q9Y3B8 237 aaKnown RBP16.89■□□□□ 0.29
CNTFR-204ENST00000610543 CNTNAP1P78357 1384 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 TBC1D12O60347 775 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 HNRNPH3P31942 346 aaKnown RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 BMS1Q14692 1282 aaKnown RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 WHAMMP3Q1A5X7 153 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 CCDC122Q5T0U0 273 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 FAM83BQ5T0W9 1011 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 FAM160B2Q86V87 743 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 AGBL3Q8NEM8 1001 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 EDEM3Q9BZQ6 932 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 TSGA10Q9BZW7 698 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 MMRN2Q9H8L6 949 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 PLAGL2Q9UPG8 496 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 OPLAHO14841 1288 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 HOXA13P31271 388 aaPredicted RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 SMAP1Q8IYB5 467 aaPredicted RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 KRT222Q8N1A0 295 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 MTMR14Q8NCE2 650 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 GLIS3Q8NEA6 775 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 JAKMIP2Q96AA8 810 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
CNTFR-204ENST00000610543 PCDHA2Q9Y5H9 948 aa16.88■□□□□ 0.29
CNTFR-204ENST00000610543 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
CNTFR-204ENST00000610543 MSH4O15457 936 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 PLA2G6O60733 806 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 HERVK_113P62684 666 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 SPA17Q15506 151 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
CNTFR-204ENST00000610543 ZHX3Q9H4I2 956 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 FAM207AQ9NSI2 230 aaPredicted RBP16.87■□□□□ 0.29
CNTFR-204ENST00000610543 EMILIN3Q9NT22 766 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 TBC1D7Q9P0N9 293 aa16.87■□□□□ 0.29
CNTFR-204ENST00000610543 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
CNTFR-204ENST00000610543 CFBP00751 764 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 MARSP56192 900 aaKnown RBP16.86■□□□□ 0.29
CNTFR-204ENST00000610543 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 POLR3CQ9BUI4 534 aaPredicted RBP16.86■□□□□ 0.29
CNTFR-204ENST00000610543 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
CNTFR-204ENST00000610543 VAV3Q9UKW4 847 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 SPATA31C1P0DKV0 1188 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
CNTFR-204ENST00000610543 CACNA2D4Q7Z3S7 1137 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 NELFCDQ8IXH7 590 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 TXLNBQ8N3L3 684 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 DEF6Q9H4E7 631 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
CNTFR-204ENST00000610543 ZBTB12Q9Y330 459 aaPredicted RBP16.86■□□□□ 0.29
CNTFR-204ENST00000610543 USO1O60763 962 aaKnown RBP16.85■□□□□ 0.29
CNTFR-204ENST00000610543 ABL1P00519 1130 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 EPS15P42566 896 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 VAV2P52735 878 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
CNTFR-204ENST00000610543 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 CCDC174Q6PII3 467 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 SCFD1Q8WVM8 642 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 MYO6Q9UM54 1294 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
CNTFR-204ENST00000610543 COL4A5P29400 1685 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms