RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 JDP2Q8WYK2 163 aa22.44■■□□□ 1.18
VSX1-202ENST00000376709 ZBED3Q96IU2 234 aaPredicted RBP22.44■■□□□ 1.18
VSX1-202ENST00000376709 FER1L6Q2WGJ9 1857 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 CFBP00751 764 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 CIITAP33076 1130 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 FIGNQ5HY92 759 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 CCDC174Q6PII3 467 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 FOXR2Q6PJQ5 311 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 IQCDQ96DY2 449 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 MYOZ2Q9NPC6 264 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 CTAGE9A4FU28 777 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 MSH4O15457 936 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 ABL1P00519 1130 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 ARHGAP25P42331 645 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 SLC12A3P55017 1021 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 FKBP3Q00688 224 aaKnown RBP22.43■■□□□ 1.18
VSX1-202ENST00000376709 FAM83AQ86UY5 434 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 CHURC1Q8WUH1 139 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 ZHX3Q9H4I2 956 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 MYO1AQ9UBC5 1043 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 DNM3Q9UQ16 869 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 STK24Q9Y6E0 443 aa22.43■■□□□ 1.18
VSX1-202ENST00000376709 A0A1W2PQJ5 194 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 TRAF5O00463 557 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 ERCC3P19447 782 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 RPA1P27694 616 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 BRCA1P38398 1863 aaKnown RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 KIF4BQ2VIQ3 1234 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 SLC35F6Q8N357 371 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 CYP2W1Q8TAV3 490 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 REXO2Q9Y3B8 237 aaKnown RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 MEIS1O00470 390 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 KIF20AO95235 890 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 CYLC1P35663 651 aaPredicted RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 SAMD1Q6SPF0 538 aaPredicted RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 SH2D4AQ9H788 454 aa22.42■■□□□ 1.18
VSX1-202ENST00000376709 DDX41Q9UJV9 622 aaKnown RBP22.42■■□□□ 1.18
VSX1-202ENST00000376709 PITPNM2Q9BZ72 1349 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 IPO7O95373 1038 aaKnown RBP22.41■■□□□ 1.18
VSX1-202ENST00000376709 CYP3A4P08684 503 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 KRT83P78385 493 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 ZCWPW2Q504Y3 356 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 NELFCDQ8IXH7 590 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 FGFBP2Q9BYJ0 223 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 TANGO6Q9C0B7 1094 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 VCPKMTQ9H867 229 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 FAM207AQ9NSI2 230 aaPredicted RBP22.41■■□□□ 1.18
VSX1-202ENST00000376709 UTRNP46939 3433 aa22.41■■□□□ 1.18
VSX1-202ENST00000376709 TBC1D12O60347 775 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 EGFRP00533 1210 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 H2AFXP16104 143 aaPredicted RBP22.4■■□□□ 1.18
VSX1-202ENST00000376709 PABPC4Q13310 644 aaKnown RBP eCLIP22.4■■□□□ 1.18
VSX1-202ENST00000376709 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
VSX1-202ENST00000376709 ARSHQ5FYA8 562 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 MMRN2Q9H8L6 949 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 PGAP2Q9UHJ9 254 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 GUCA1BQ9UMX6 200 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 PCDHA2Q9Y5H9 948 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 COL4A3BPQ9Y5P4 624 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 GCOM1H8Y6P7 765 aaPredicted RBP22.4■■□□□ 1.18
VSX1-202ENST00000376709 POLR2MP0CAP2 368 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 SPATA31C1P0DKV0 1188 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 PSMC6P62333 389 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 CYP4A11Q02928 519 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 CCDC40Q4G0X9 1142 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 CCDC125Q86Z20 511 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 HAUS4Q9H6D7 363 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 NHEJ1Q9H9Q4 299 aaPredicted RBP22.4■■□□□ 1.18
VSX1-202ENST00000376709 PRDM10Q9NQV6 1147 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 SIK3Q9Y2K2 1263 aa22.4■■□□□ 1.18
VSX1-202ENST00000376709 CAP2P40123 477 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 TNIP1Q15025 636 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 CCDC170Q8IYT3 715 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 NAPGQ99747 312 aaPredicted RBP22.39■■□□□ 1.18
VSX1-202ENST00000376709 RANBP17Q9H2T7 1088 aaKnown RBP22.39■■□□□ 1.18
VSX1-202ENST00000376709 EMILIN3Q9NT22 766 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 ARGLU1Q9NWB6 273 aaPredicted RBP22.39■■□□□ 1.18
VSX1-202ENST00000376709 OGFRQ9NZT2 677 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 VAV3Q9UKW4 847 aa22.39■■□□□ 1.18
VSX1-202ENST00000376709 TEX35Q5T0J7 233 aa22.39■■□□□ 1.17
VSX1-202ENST00000376709 KIAA1328Q86T90 577 aa22.39■■□□□ 1.17
VSX1-202ENST00000376709 TEX2Q8IWB9 1127 aa22.39■■□□□ 1.17
VSX1-202ENST00000376709 TBC1D5Q92609 795 aa22.39■■□□□ 1.17
VSX1-202ENST00000376709 CDC23Q9UJX2 597 aa22.39■■□□□ 1.17
VSX1-202ENST00000376709 FRMD3A2A2Y4 597 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 HERVK_113P62684 666 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 RASSF7Q02833 373 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 SYT2Q8N9I0 419 aaPredicted RBP22.38■■□□□ 1.17
VSX1-202ENST00000376709 SCFD1Q8WVM8 642 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 TRIM10Q9UDY6 481 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 TUBB2AQ13885 445 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 CCDC122Q5T0U0 273 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 FAM160B2Q86V87 743 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 GOLGA1Q92805 767 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 CEP63Q96MT8 703 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 TUBB2BQ9BVA1 445 aa22.38■■□□□ 1.17
VSX1-202ENST00000376709 GLIS2Q9BZE0 524 aaPredicted RBP22.38■■□□□ 1.17
VSX1-202ENST00000376709 ZNF446Q9NWS9 450 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms