RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CNOT6LQ96LI5 555 aaKnown RBP11.67□□□□□ -0.54
USP43-205ENST00000574408 CCDC94Q9BW85 323 aaPredicted RBP11.67□□□□□ -0.54
USP43-205ENST00000574408 BMP2KQ9NSY1 1161 aaPredicted RBP11.67□□□□□ -0.54
USP43-205ENST00000574408 MED24O75448 989 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 RANBP17Q9H2T7 1088 aaKnown RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 SEMA6BQ9H3T3 888 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 GJA3Q9Y6H8 435 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 PIK3CDO00329 1044 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 PLA2G4BP0C869 781 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 RASSF7Q02833 373 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 LRRC41Q15345 812 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 HAUS3Q68CZ6 603 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 SAMD7Q7Z3H4 446 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 TUBGCP2Q9BSJ2 902 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 GCOM1H8Y6P7 765 aaPredicted RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 TBX3O15119 743 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 MSH4O15457 936 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 POLR2MP0CAP2 368 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 GMPSP49915 693 aaPredicted RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 SPIRE1Q08AE8 756 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 TNFAIP1Q13829 316 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 R3HDM1Q15032 1099 aaKnown RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 TBC1D10BQ4KMP7 808 aaPredicted RBP11.66□□□□□ -0.54
USP43-205ENST00000574408 COBLL1Q53SF7 1204 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 GPBP1Q86WP2 473 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 FAM114A1Q8IWE2 563 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 DNAJC19Q96DA6 116 aa11.66□□□□□ -0.54
USP43-205ENST00000574408 ASTN2O75129 1339 aaPredicted RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 B4DLN1 442 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 CIITAP33076 1130 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 ZNF280AP59817 542 aaPredicted RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 UBXN2AP68543 259 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 COASYQ13057 564 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 CENPPQ6IPU0 288 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 GUF1Q8N442 669 aaKnown RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 GLIS3Q8NEA6 775 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 ERMNQ8TAM6 284 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 FAM20AQ96MK3 541 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 FEM1BQ9UK73 627 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 MRPL11Q9Y3B7 192 aaKnown RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 KRT18P05783 430 aaKnown RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 TRIM14Q14142 442 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 RAD9BQ6WBX8 426 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 CCDC51Q96ER9 411 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 NAA15Q9BXJ9 866 aaKnown RBP11.65□□□□□ -0.54
USP43-205ENST00000574408 PANK4Q9NVE7 773 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 TBC1D7Q9P0N9 293 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 FER1L6Q2WGJ9 1857 aa11.65□□□□□ -0.54
USP43-205ENST00000574408 NPHP3-ACAD11A0A0J9YXS1 232 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 MEIS1O00470 390 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 RPS12P25398 132 aaKnown RBP11.64□□□□□ -0.55
USP43-205ENST00000574408 KRT9P35527 623 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 FAM26FQ5R3K3 315 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 MTERF4Q7Z6M4 381 aaKnown RBP11.64□□□□□ -0.55
USP43-205ENST00000574408 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 ZNF507Q8TCN5 953 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 PHF20L1A8MW92 1017 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 CTIFO43310 598 aaKnown RBP11.64□□□□□ -0.55
USP43-205ENST00000574408 CYP3A4P08684 503 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 INPP5BP32019 993 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 CYP4A11Q02928 519 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 EHHADHQ08426 723 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 ZHX3Q9H4I2 956 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 ABHD10Q9NUJ1 306 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 PLA2G6O60733 806 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 CYP11B2P19099 503 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 DNM2P50570 870 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 PSMD2Q13200 908 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 SLC30A10Q6XR72 485 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 CCDC65Q8IXS2 484 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 MYOCDQ8IZQ8 938 aa11.64□□□□□ -0.55
USP43-205ENST00000574408 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
USP43-205ENST00000574408 CNOT7Q9UIV1 285 aaKnown RBP11.64□□□□□ -0.55
USP43-205ENST00000574408 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 GOLGA6L9A6NEM1 432 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 SLC26A4O43511 780 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 TUBB4AP04350 444 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 CCDC175P0C221 793 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
USP43-205ENST00000574408 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
USP43-205ENST00000574408 NKRFO15226 690 aaKnown RBP eCLIP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms