RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 HACL1Q9UJ83 578 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 VAV3Q9UKW4 847 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 PPP2R2CQ9Y2T4 447 aa21.33■■□□□ 1
SMPD3-203ENST00000563226 IGLV3-22A0A075B6J6 115 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 PPP1R2P41236 205 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 COASYQ13057 564 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 LRRC41Q15345 812 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 LDHDQ86WU2 507 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 CATSPER3Q86XQ3 398 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 ZNF507Q8TCN5 953 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 CNOT6LQ96LI5 555 aaKnown RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 DESI2Q9BSY9 194 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 WDR18Q9BV38 432 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 GTPBP4Q9BZE4 634 aaKnown RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 LRRC27Q9C0I9 530 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 MAGEC2Q9UBF1 373 aaPredicted RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 CNOT7Q9UIV1 285 aaKnown RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 CD2APQ9Y5K6 639 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 GCOM1H8Y6P7 765 aaPredicted RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 POLR2MP0CAP2 368 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 ZNF76P36508 570 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 PTGER2P43116 358 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 RBM10P98175 930 aaKnown RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 CACNB1Q02641 598 aaPredicted RBP21.32■■□□□ 1
SMPD3-203ENST00000563226 TNFAIP1Q13829 316 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 MB21D1Q8N884 522 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 LTBP3Q9NS15 1303 aa21.32■■□□□ 1
SMPD3-203ENST00000563226 FZD9O00144 591 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 SPATA31C1P0DKV0 1188 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 PSMC6P62333 389 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 SYT10Q6XYQ8 523 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 ZFP91Q96JP5 570 aaPredicted RBP21.31■■□□□ 1
SMPD3-203ENST00000563226 AGBL1Q96MI9 1066 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 FAM20AQ96MK3 541 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 TUBGCP2Q9BSJ2 902 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 FGFBP2Q9BYJ0 223 aa21.31■■□□□ 1
SMPD3-203ENST00000563226 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.31■■□□□ 1
SMPD3-203ENST00000563226 RBBP6Q7Z6E9 1792 aaKnown RBP21.31■■□□□ 1
SMPD3-203ENST00000563226 ZNF536O15090 1300 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 B4DLN1 442 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 MEIS1O00470 390 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 PES1O00541 588 aaKnown RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 CYP11B2P19099 503 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 TRAF1Q13077 416 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 RAD9BQ6WBX8 426 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 GPBP1Q86WP2 473 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 GUF1Q8N442 669 aaKnown RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 PANK4Q9NVE7 773 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 MRPL11Q9Y3B7 192 aaKnown RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 KIF2AO00139 706 aaPredicted RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 CCP110O43303 1012 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 PRKCSHP14314 528 aaPredicted RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 SLC12A3P55017 1021 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 RAD51AP2Q09MP3 1159 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 NBPF12Q5TAG4 269 aaPredicted RBP21.3■■□□□ 1
SMPD3-203ENST00000563226 HAUS3Q68CZ6 603 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 CNGA4Q8IV77 575 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 KIF18AQ8NI77 898 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 DEFB129Q9H1M3 183 aa21.3■■□□□ 1
SMPD3-203ENST00000563226 EML1O00423 815 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 KIF4BQ2VIQ3 1234 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 ARSHQ5FYA8 562 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 TRIM65Q6PJ69 517 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 TBC1D7Q9P0N9 293 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 ABCB11O95342 1321 aa21.29■■□□□ 1
SMPD3-203ENST00000563226 FANCGO15287 622 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 ZSCAN12O43309 604 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 SLC26A4O43511 780 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 PSMD2Q13200 908 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 ABHD10Q9NUJ1 306 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 CTIFO43310 598 aaKnown RBP21.28■■□□□ 1
SMPD3-203ENST00000563226 FECHP22830 423 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 RPA1P27694 616 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 CYP4A11Q02928 519 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 MIIPQ5JXC2 388 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 ERMNQ8TAM6 284 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 DOCK1Q14185 1865 aa21.28■■□□□ 1
SMPD3-203ENST00000563226 MTIF2P46199 727 aaKnown RBP21.27■■□□□ 1
SMPD3-203ENST00000563226 FAM26FQ5R3K3 315 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 FAM114A1Q8IWE2 563 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 CCDC51Q96ER9 411 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 KIAA1683Q9H0B3 1180 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 CCPG1Q9ULG6 757 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 PCDHA2Q9Y5H9 948 aa21.27■■□□□ 1
SMPD3-203ENST00000563226 A0A1W2PQC6 194 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 WDR46O15213 610 aaKnown RBP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 ICAM1P05362 532 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 TPM1P09493 284 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 KLK7P49862 253 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 ETF1P62495 437 aaKnown RBP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 ERVK-24P63145 666 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 PABPC4Q13310 644 aaKnown RBP eCLIP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 TRIM14Q14142 442 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 SLF1Q9BQI6 1058 aa21.27■□□□□ 0.99
SMPD3-203ENST00000563226 NAA15Q9BXJ9 866 aaKnown RBP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 MRPL44Q9H9J2 332 aaKnown RBP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 BMP2KQ9NSY1 1161 aaPredicted RBP21.27■□□□□ 0.99
SMPD3-203ENST00000563226 FZD1Q9UP38 647 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms