RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SYCP1Q15431 976 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 FAM20AQ96MK3 541 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 L2HGDHQ9H9P8 463 aa27.35■■□□□ 1.97
VRK2-202ENST00000412104 NFKBIEO00221 500 aa27.34■■□□□ 1.97
VRK2-202ENST00000412104 ASNSP08243 561 aa27.34■■□□□ 1.97
VRK2-202ENST00000412104 FAM160B2Q86V87 743 aa27.34■■□□□ 1.97
VRK2-202ENST00000412104 BMP2KQ9NSY1 1161 aaPredicted RBP27.34■■□□□ 1.97
VRK2-202ENST00000412104 SCAF8Q9UPN6 1271 aaKnown RBP27.34■■□□□ 1.97
VRK2-202ENST00000412104 MSH4O15457 936 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 CFBP00751 764 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 MTIF2P46199 727 aaKnown RBP27.33■■□□□ 1.97
VRK2-202ENST00000412104 NCBP1Q09161 790 aaKnown RBP27.33■■□□□ 1.97
VRK2-202ENST00000412104 TNIP1Q15025 636 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 NCAPH2Q6IBW4 605 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 CCDC84Q86UT8 332 aaPredicted RBP27.33■■□□□ 1.97
VRK2-202ENST00000412104 ERMNQ8TAM6 284 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 PANK4Q9NVE7 773 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 ADGRG1Q9Y653 693 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 POTEFA5A3E0 1075 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 FANCGO15287 622 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 POTEIP0CG38 1075 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 KRT9P35527 623 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 RASA3Q14644 834 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 POTEGQ6S5H5 508 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 POTEEQ6S8J3 1075 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 GLIS3Q8NEA6 775 aa27.33■■□□□ 1.97
VRK2-202ENST00000412104 MRPL44Q9H9J2 332 aaKnown RBP27.33■■□□□ 1.97
VRK2-202ENST00000412104 ZNF215Q9UL58 517 aaPredicted RBP27.33■■□□□ 1.97
VRK2-202ENST00000412104 ZNF76P36508 570 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 ZNF280AP59817 542 aaPredicted RBP27.32■■□□□ 1.96
VRK2-202ENST00000412104 ERVK-24P63145 666 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 LRRC63Q05C16 580 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 GPBP1Q86WP2 473 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 TMTC1Q8IUR5 882 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 CYP2W1Q8TAV3 490 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 ANKRD7Q92527 254 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 FEM1BQ9UK73 627 aa27.32■■□□□ 1.96
VRK2-202ENST00000412104 TTC26A0AVF1 554 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 EGFRP00533 1210 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 HSP90AA2PQ14568 343 aaPredicted RBP27.31■■□□□ 1.96
VRK2-202ENST00000412104 LRRC41Q15345 812 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 MIIPQ5JXC2 388 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 CATSPER3Q86XQ3 398 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 TBC1D5Q92609 795 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 MTFR1LQ9H019 292 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 FBXO28Q9NVF7 368 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 VAV3Q9UKW4 847 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 GCOM1H8Y6P7 765 aaPredicted RBP27.31■■□□□ 1.96
VRK2-202ENST00000412104 POLR2MP0CAP2 368 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 CYP11B2P19099 503 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 FAM26FQ5R3K3 315 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 MTERF4Q7Z6M4 381 aaKnown RBP27.31■■□□□ 1.96
VRK2-202ENST00000412104 MAP7D2Q96T17 732 aa27.31■■□□□ 1.96
VRK2-202ENST00000412104 NOC4LQ9BVI4 516 aaKnown RBP27.31■■□□□ 1.96
VRK2-202ENST00000412104 MRPL11Q9Y3B7 192 aaKnown RBP27.31■■□□□ 1.96
VRK2-202ENST00000412104 IGLV3-22A0A075B6J6 115 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 PHF20L1A8MW92 1017 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 SLU7O95391 586 aaKnown RBP27.3■■□□□ 1.96
VRK2-202ENST00000412104 RPA1P27694 616 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 SLC12A3P55017 1021 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 SAMD1Q6SPF0 538 aaPredicted RBP27.3■■□□□ 1.96
VRK2-202ENST00000412104 CYP26C1Q6V0L0 522 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 CCDC65Q8IXS2 484 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 MYOCDQ8IZQ8 938 aa27.3■■□□□ 1.96
VRK2-202ENST00000412104 NKRFO15226 690 aaKnown RBP eCLIP27.29■■□□□ 1.96
VRK2-202ENST00000412104 SPATA31C1P0DKV0 1188 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 FOXR2Q6PJQ5 311 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 TEPSINQ96N21 525 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 FEZ1Q99689 392 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 ZNF341Q9BYN7 854 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 PPP1R1BQ9UD71 204 aaPredicted RBP27.29■■□□□ 1.96
VRK2-202ENST00000412104 STK24Q9Y6E0 443 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 NPHP3-ACAD11A0A0J9YXS1 232 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 FGFR1OPO95684 399 aaKnown RBP27.29■■□□□ 1.96
VRK2-202ENST00000412104 RPS12P25398 132 aaKnown RBP27.29■■□□□ 1.96
VRK2-202ENST00000412104 TBC1D8BQ0IIM8 1120 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 TNFAIP1Q13829 316 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 NAA30Q147X3 362 aaPredicted RBP27.29■■□□□ 1.96
VRK2-202ENST00000412104 ERO1AQ96HE7 468 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 TSG101Q99816 390 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 CAPN11Q9UMQ6 739 aa27.29■■□□□ 1.96
VRK2-202ENST00000412104 LUC7L2Q9Y383 392 aaKnown RBP27.29■■□□□ 1.96
VRK2-202ENST00000412104 GNG11P61952 73 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 LRRC55Q6ZSA7 311 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 DNAJC7Q99615 494 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 WDR18Q9BV38 432 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 PCDHA2Q9Y5H9 948 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 ABCB11O95342 1321 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 CACNB1Q02641 598 aaPredicted RBP27.28■■□□□ 1.96
VRK2-202ENST00000412104 KIF4BQ2VIQ3 1234 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 LDHDQ86WU2 507 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 OR8K1Q8NGG5 319 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 WDR24Q96S15 920 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 TTYH3Q9C0H2 523 aa27.28■■□□□ 1.96
VRK2-202ENST00000412104 PITPNM2Q9BZ72 1349 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 FRMD3A2A2Y4 597 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 PTGER2P43116 358 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 PSMC6P62333 389 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 ARSHQ5FYA8 562 aa27.27■■□□□ 1.96
VRK2-202ENST00000412104 ERGIC2Q96RQ1 377 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms