RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 STX10O60499 249 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 TPM1P09493 284 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 UBXN1Q04323 297 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 NBPF12Q5TAG4 269 aaPredicted RBP23.09■■□□□ 1.29
USP39-203ENST00000409470 KIAA1683Q9H0B3 1180 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.09■■□□□ 1.297e-6■■□□□ 12.1
USP39-203ENST00000409470 PES1O00541 588 aaKnown RBP23.09■■□□□ 1.29
USP39-203ENST00000409470 PSMD2Q13200 908 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 SLF1Q9BQI6 1058 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 CCPG1Q9ULG6 757 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 STK24Q9Y6E0 443 aa23.09■■□□□ 1.29
USP39-203ENST00000409470 FAM114A1Q8IWE2 563 aa23.08■■□□□ 1.29
USP39-203ENST00000409470 PRPF38AQ8NAV1 312 aaKnown RBP23.08■■□□□ 1.29
USP39-203ENST00000409470 PANX2Q96RD6 677 aa23.08■■□□□ 1.29
USP39-203ENST00000409470 PAXBP1Q9Y5B6 917 aa23.08■■□□□ 1.29
USP39-203ENST00000409470 POTEFA5A3E0 1075 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 ICAM1P05362 532 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 POTEIP0CG38 1075 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 HOXA7P31268 230 aaPredicted RBP23.08■■□□□ 1.28
USP39-203ENST00000409470 DCAF15Q66K64 600 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 POTEGQ6S5H5 508 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 POTEEQ6S8J3 1075 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 GPBP1Q86WP2 473 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 CATSPER3Q86XQ3 398 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 DNAJC19Q96DA6 116 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 AGBL1Q96MI9 1066 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 PANK4Q9NVE7 773 aa23.08■■□□□ 1.28
USP39-203ENST00000409470 KIF2AO00139 706 aaPredicted RBP23.07■■□□□ 1.28
USP39-203ENST00000409470 UBXN2AP68543 259 aa23.07■■□□□ 1.28
USP39-203ENST00000409470 CENPPQ6IPU0 288 aa23.07■■□□□ 1.28
USP39-203ENST00000409470 GUF1Q8N442 669 aaKnown RBP23.07■■□□□ 1.28
USP39-203ENST00000409470 EEF2KMTQ96G04 330 aa23.07■■□□□ 1.28
USP39-203ENST00000409470 TANGO6Q9C0B7 1094 aa23.07■■□□□ 1.28
USP39-203ENST00000409470 SEMA6BQ9H3T3 888 aa23.07■■□□□ 1.28
USP39-203ENST00000409470 IGLV3-22A0A075B6J6 115 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 RIOK3O14730 519 aaKnown RBP23.06■■□□□ 1.28
USP39-203ENST00000409470 MFAP3LO75121 409 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 PRKCSHP14314 528 aaPredicted RBP23.06■■□□□ 1.28
USP39-203ENST00000409470 RPA1P27694 616 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 CASP14P31944 242 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 COASYQ13057 564 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 CNGA4Q8IV77 575 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 HOOK2Q96ED9 719 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 VAV3Q9UKW4 847 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 LGALS16A8MUM7 142 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 GYPCP04921 128 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 KRT18P05783 430 aaKnown RBP23.06■■□□□ 1.28
USP39-203ENST00000409470 EHHADHQ08426 723 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 DGKZQ13574 1117 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 CCDC65Q8IXS2 484 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 CNOT6LQ96LI5 555 aaKnown RBP23.06■■□□□ 1.28
USP39-203ENST00000409470 DNM3Q9UQ16 869 aa23.06■■□□□ 1.28
USP39-203ENST00000409470 ZSCAN12O43309 604 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 MTMR2Q13614 643 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 TRIM14Q14142 442 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 ANGEL2Q5VTE6 544 aaKnown RBP23.05■■□□□ 1.28
USP39-203ENST00000409470 APOBEC3FQ8IUX4 373 aaKnown RBP23.05■■□□□ 1.28
USP39-203ENST00000409470 MB21D1Q8N884 522 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 TUBGCP2Q9BSJ2 902 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 WDR18Q9BV38 432 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 ZNF536O15090 1300 aa23.05■■□□□ 1.28
USP39-203ENST00000409470 MEIS1O00470 390 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 MTIF2P46199 727 aaKnown RBP23.04■■□□□ 1.28
USP39-203ENST00000409470 DYNC1I1O14576 645 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 FLOT1O75955 427 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 SPATA31C1P0DKV0 1188 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 CYP11B2P19099 503 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 FXR1P51114 621 aaKnown RBP eCLIP23.04■■□□□ 1.28
USP39-203ENST00000409470 SLC12A3P55017 1021 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 LRRC41Q15345 812 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 FAM26FQ5R3K3 315 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 CPXCR1Q8N123 301 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 CCDC51Q96ER9 411 aa23.04■■□□□ 1.28
USP39-203ENST00000409470 NAA15Q9BXJ9 866 aaKnown RBP23.04■■□□□ 1.28
USP39-203ENST00000409470 NPHP3-ACAD11A0A0J9YXS1 232 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 CYP4A11Q02928 519 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 CEP55Q53EZ4 464 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 LRCH2Q5VUJ6 765 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 MYOCDQ8IZQ8 938 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 TSG101Q99816 390 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 PPP2R2CQ9Y2T4 447 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 CTDP1Q9Y5B0 961 aaPredicted RBP23.03■■□□□ 1.28
USP39-203ENST00000409470 B4DLN1 442 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 FGFR1OPO95684 399 aaKnown RBP23.03■■□□□ 1.28
USP39-203ENST00000409470 VCAM1P19320 739 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 DNM2P50570 870 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 USP14P54578 494 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 CACNB1Q02641 598 aaPredicted RBP23.03■■□□□ 1.28
USP39-203ENST00000409470 LRRC63Q05C16 580 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 RAD51AP2Q09MP3 1159 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 PRAMEF18Q5VWM3 479 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 ARHGAP27Q6ZUM4 889 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 KIF18AQ8NI77 898 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 EIF2AK1Q9BQI3 630 aaKnown RBP23.03■■□□□ 1.28
USP39-203ENST00000409470 PICK1Q9NRD5 415 aa23.03■■□□□ 1.28
USP39-203ENST00000409470 A0A1W2PQC6 194 aa23.02■■□□□ 1.28
USP39-203ENST00000409470 ALAS1P13196 640 aa23.02■■□□□ 1.28
USP39-203ENST00000409470 HSD17B4P51659 736 aa23.02■■□□□ 1.28
USP39-203ENST00000409470 PSMC6P62333 389 aa23.02■■□□□ 1.28
USP39-203ENST00000409470 SPP2Q13103 211 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms