RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CYP3A4P08684 503 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 COBLL1Q53SF7 1204 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 MTERF4Q7Z6M4 381 aaKnown RBP13.55□□□□□ -0.24
ITGB1-202ENST00000396033 TEX2Q8IWB9 1127 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 CPLX3Q8WVH0 158 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 TBC1D5Q92609 795 aa13.55□□□□□ -0.24
ITGB1-202ENST00000396033 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
ITGB1-202ENST00000396033 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
ITGB1-202ENST00000396033 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 ANKRD7Q92527 254 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 ABCB11O95342 1321 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 MSH4O15457 936 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 STX10O60499 249 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 MED24O75448 989 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 TPM1P09493 284 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 UBXN1Q04323 297 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 LDHDQ86WU2 507 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
ITGB1-202ENST00000396033 ZNF541Q9H0D2 1346 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
ITGB1-202ENST00000396033 PLA2G4BP0C869 781 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 INPP5BP32019 993 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
ITGB1-202ENST00000396033 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
ITGB1-202ENST00000396033 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.242e-8■□□□□ 10.9
ITGB1-202ENST00000396033 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 WDR46O15213 610 aaKnown RBP13.53□□□□□ -0.24
ITGB1-202ENST00000396033 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 PANX2Q96RD6 677 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 PAXBP1Q9Y5B6 917 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
ITGB1-202ENST00000396033 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
ITGB1-202ENST00000396033 MFAP3LO75121 409 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 PTGER2P43116 358 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 FAM114A1Q8IWE2 563 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 LPAR1Q92633 364 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 CCPG1Q9ULG6 757 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 GYPCP04921 128 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 CASP14P31944 242 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 UBXN2AP68543 259 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 COASYQ13057 564 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 DNAJC19Q96DA6 116 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 CNOT6LQ96LI5 555 aaKnown RBP13.53□□□□□ -0.24
ITGB1-202ENST00000396033 SLF1Q9BQI6 1058 aa13.53□□□□□ -0.24
ITGB1-202ENST00000396033 LGALS16A8MUM7 142 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 PSMD2Q13200 908 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 NBPF12Q5TAG4 269 aaPredicted RBP13.52□□□□□ -0.24
ITGB1-202ENST00000396033 CNGA4Q8IV77 575 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 SEMA6BQ9H3T3 888 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 GINM1Q9NU53 330 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 PANK4Q9NVE7 773 aa13.52□□□□□ -0.24
ITGB1-202ENST00000396033 DGKZQ13574 1117 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 CATSPER3Q86XQ3 398 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 GUF1Q8N442 669 aaKnown RBP13.52□□□□□ -0.25
ITGB1-202ENST00000396033 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 TANGO6Q9C0B7 1094 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 VAV3Q9UKW4 847 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 IGLV3-22A0A075B6J6 115 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 ZSCAN12O43309 604 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 ICAM1P05362 532 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 EHHADHQ08426 723 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 TRIM14Q14142 442 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 CENPPQ6IPU0 288 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 HOOK2Q96ED9 719 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 WDR18Q9BV38 432 aa13.52□□□□□ -0.25
ITGB1-202ENST00000396033 KRT18P05783 430 aaKnown RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 DCAF15Q66K64 600 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 CCDC65Q8IXS2 484 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 PRPF38AQ8NAV1 312 aaKnown RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 MEIS1O00470 390 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 RPA1P27694 616 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 MTIF2P46199 727 aaKnown RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.255e-10■■■□□ 15.4
ITGB1-202ENST00000396033 MTMR2Q13614 643 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 LRRC41Q15345 812 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 MB21D1Q8N884 522 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 PPP2R2CQ9Y2T4 447 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 NPHP3-ACAD11A0A0J9YXS1 232 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 B4DLN1 442 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 CACNB1Q02641 598 aaPredicted RBP13.51□□□□□ -0.25
ITGB1-202ENST00000396033 TOGARAM2Q6ZUX3 1019 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 CCDC51Q96ER9 411 aa13.51□□□□□ -0.25
ITGB1-202ENST00000396033 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms