RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 DDX41Q9UJV9 622 aaKnown RBP5.87□□□□□ -1.47
USH1C-210ENST00000534556 TBX21Q9UL17 535 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NR2E3Q9Y5X4 410 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NID2Q14112 1375 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 ARID2Q68CP9 1835 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 KIAA1671Q9BY89 1806 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NLRC5Q86WI3 1866 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 XIRP2A4UGR9 3374 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 LOC102724159A0A0B4J2E5 919 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 MOXD2PA6NHM9 499 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 A6NJR5 290 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 STXBP3O00186 592 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 ARVCFO00192 962 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 KIAA0355O15063 1070 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 PQBP1O60828 265 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 ATP9AO75110 1047 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 TXNP10599 105 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 MYCLP12524 364 aaPredicted RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 SMARCA1P28370 1054 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 EVCP57679 992 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 SART3Q15020 963 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 PWP2Q15269 919 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 SHHQ15465 462 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 NFXL1Q6ZNB6 911 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 FCHSD1Q86WN1 690 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 FBXL16Q8N461 479 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 OR6J1Q8NGC5 347 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 CTCFLQ8NI51 663 aaPredicted RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 NSUN6Q8TEA1 469 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 AFG1LQ8WV93 481 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 PGBD1Q96JS3 809 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 OSBPL7Q9BZF2 842 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 UPF3BQ9BZI7 483 aaKnown RBP5.86□□□□□ -1.47
USH1C-210ENST00000534556 TRPV6Q9H1D0 765 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 ZSWIM6Q9HCJ5 1215 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 STARD7Q9NQZ5 370 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 SLC12A7Q9Y666 1083 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 VCANP13611 3396 aa5.86□□□□□ -1.47
USH1C-210ENST00000534556 ELP1O95163 1332 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 GOLGA8AA7E2F4 631 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 GOLGA8BA8MQT2 603 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 GCOM1H8Y6P7 765 aaPredicted RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 PIK3CDO00329 1044 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 ZBTB43O43298 467 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 B4GALT4O60513 344 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 EIF3JO75822 258 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 LARGE1O95461 756 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 CLTBP09497 229 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 POLR2MP0CAP2 368 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 CYP2C9P11712 490 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 CYP2C18P33260 490 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 CLK2P49760 499 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 CCT2P78371 535 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 ST3GAL1Q11201 340 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 ITGA7Q13683 1181 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 GPNMBQ14956 572 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 NPY5RQ15761 445 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 STXBP2Q15833 593 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 RTN1Q16799 776 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 TCTN1Q2MV58 587 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 NBPF20Q3BBV1 942 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 HSDL1Q3SXM5 330 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 C8orf34Q49A92 452 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 RNF20Q5VTR2 975 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 ARHGEF16Q5VV41 709 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 MYSM1Q5VVJ2 828 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 FAM109BQ6ICB4 259 aaPredicted RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 BLOC1S2Q6QNY1 142 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 NOL8Q76FK4 1167 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 RUFY3Q7L099 469 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 MCF2L2Q86YR7 1114 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 TMTC2Q8N394 836 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 SCFD2Q8WU76 684 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 CRYGNQ8WXF5 182 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 WNT8BQ93098 351 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 PHKBQ93100 1093 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 RRP36Q96EU6 259 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 IL17RAQ96F46 866 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 TOX2Q96NM4 488 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 IWS1Q96ST2 819 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 KIF2CQ99661 725 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 MAF1Q9H063 256 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 WNT8AQ9H1J5 351 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 PRDM5Q9NQX1 630 aaPredicted RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 TRMT13Q9NUP7 481 aaKnown RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 RTEL1Q9NZ71 1219 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 Q9Y3F1 56 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 V9GY48 417 aaPredicted RBP5.85□□□□□ -1.47
USH1C-210ENST00000534556 TRIOO75962 3097 aa5.85□□□□□ -1.47
USH1C-210ENST00000534556 A0A0U1RQG5 324 aaPredicted RBP5.84□□□□□ -1.47
USH1C-210ENST00000534556 SPATA31C2B4DYI2 1134 aa5.84□□□□□ -1.47
USH1C-210ENST00000534556 HAS3O00219 553 aa5.84□□□□□ -1.47
USH1C-210ENST00000534556 REC8O95072 547 aa5.84□□□□□ -1.47
USH1C-210ENST00000534556 CTDNEP1O95476 244 aa5.84□□□□□ -1.47
USH1C-210ENST00000534556 GGPS1O95749 300 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms