RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 RTP2Q5QGT7 225 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 SDE2Q6IQ49 451 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 ADCY4Q8NFM4 1077 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 LGR4Q9BXB1 951 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 EPN3Q9H201 632 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 APEX2Q9UBZ4 518 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 SUGT1Q9Y2Z0 365 aa6.93□□□□□ -1.3
SMCHD1-205ENST00000581383 F8W031 263 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 MAPKAPK2P49137 400 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 PLEKHN1Q494U1 663 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 PAQR3Q6TCH7 311 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 USP33Q8TEY7 942 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 ZNF669Q96BR6 464 aaPredicted RBP6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 TNFRSF12AQ9NP84 129 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 WHRNQ9P202 907 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 JAG2Q9Y219 1238 aa6.92□□□□□ -1.3
SMCHD1-205ENST00000581383 AGRPO00253 132 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 FOXD2O60548 495 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 CYBBP04839 570 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 L1CAMP32004 1257 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 SEPHS1P49903 392 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 MVKQ03426 396 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 FAM129CQ86XR2 697 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 ZNF513Q8N8E2 541 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 TMEM52Q8NDY8 209 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 FEZF2Q8TBJ5 459 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 PTCHD1Q96NR3 888 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 SPATA9Q9BWV2 254 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 PDLIM7Q9NR12 457 aa6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 DIS3Q9Y2L1 958 aaKnown RBP6.91□□□□□ -1.3
SMCHD1-205ENST00000581383 A0A1W2PQU0 124 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 FGF10O15520 208 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 ITGAVP06756 1048 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 FAM153BP0C7A2 387 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 IFNGR1P15260 489 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 LIMS1P48059 325 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 DPY19L1Q2PZI1 675 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 IGDCC3Q8IVU1 814 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 LRRC47Q8N1G4 583 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 BVESQ8NE79 360 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 THAP3Q8WTV1 239 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 FCRL3Q96P31 734 aaPredicted RBP6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 AKT3Q9Y243 479 aa6.9□□□□□ -1.3
SMCHD1-205ENST00000581383 NOP56O00567 594 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 MSL3P1P0C860 447 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 SQSTM1Q13501 440 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 C2orf27AQ580R0 203 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 TMEFF1Q8IYR6 380 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 SGSM3Q96HU1 749 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
SMCHD1-205ENST00000581383 A0A087WZG4 1122 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ESYT3A0FGR9 886 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ZC3H12DA2A288 527 aaKnown RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 OTOL1A6NHN0 477 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 STXBP3O00186 592 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 TBX1O43435 398 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ADCY3O60266 1144 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 DBHP09172 617 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 CBX2Q14781 532 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ZNF227Q86WZ6 799 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ARHGEF39Q8N4T4 335 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 ALG3Q92685 438 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 FANCLQ9NW38 375 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 CGGBP1Q9UFW8 167 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 NUDT5Q9UKK9 219 aa6.88□□□□□ -1.31
SMCHD1-205ENST00000581383 VAMP4O75379 141 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 KCNH1O95259 989 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 GRIA2P42262 883 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 KCNC1P48547 511 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 PRR5P85299 388 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 JMYQ8N9B5 988 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 ARHGEF4Q9NR80 690 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 EMC9Q9Y3B6 208 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 PTCH2Q9Y6C5 1203 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 PMF1-BGLAPU3KQ54 211 aa6.87□□□□□ -1.31
SMCHD1-205ENST00000581383 CDC45O75419 566 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 CELA3BP08861 270 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 NCAM1P13591 858 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 HSD3B2P26439 372 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 CORO7P57737 925 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 AMPD2Q01433 879 aa6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 HSP90AA2PQ14568 343 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 YOD1Q5VVQ6 348 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-205ENST00000581383 POMZP3Q6PJE2 187 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms