RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TMPRSS15P98073 1019 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 OCRLQ01968 901 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 ITKQ08881 620 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 PIN1Q13526 163 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 PPP2R5AQ15172 486 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 MBLAC2Q68D91 279 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 Q8N1Y9 231 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCDC136Q96JN2 1154 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 PTCHD1Q96NR3 888 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 CDH19Q9H159 772 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 CABP5Q9NP86 173 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 TRHDEQ9UKU6 1024 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 TCFL5Q9UL49 500 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 U3KQE9 123 aa7.33□□□□□ -1.24
HMGB1P47-201ENST00000511281 SHTN1A0MZ66 631 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 PRC1O43663 620 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 GAS7O60861 476 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 SOD2P04179 222 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 F13BP05160 661 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 SYPP08247 313 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 GSTM1P09488 218 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 CHRNA4P43681 627 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 RAB27AP51159 221 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 GTF2A2P52657 109 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 LACTBP83111 547 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 INF2Q27J81 1249 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 INAVAQ3KP66 663 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 FAM47CQ5HY64 1035 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 DUSP27Q5VZP5 1158 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCSAPQ6IQ19 270 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 TMPRSS7Q7RTY8 843 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 SHISA5Q8N114 240 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 FBXW5Q969U6 566 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 MTMR8Q96EF0 704 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 EMC7Q9NPA0 242 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 SEMA3GQ9NS98 782 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 COQ6Q9Y2Z9 468 aa7.32□□□□□ -1.24
HMGB1P47-201ENST00000511281 TMEM82A0PJX8 343 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 WDR64B1ANS9 1081 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 FAM47E-STBD1D6RA91 191 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 ULK1O75385 1050 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 FBXO21O94952 628 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 SCGB1D2O95969 90 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 CEACAM5P06731 702 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 PYGMP11217 842 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 GRK2P25098 689 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 GRK3P35626 688 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 ERVK-21P61565 698 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 SART3Q15020 963 aaKnown RBP7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 ARHGAP44Q17R89 818 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 NXNQ6DKJ4 435 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 PRR23CQ6ZRP0 262 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 CD163Q86VB7 1156 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 NXPE1Q8N323 547 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 COG1Q8WTW3 980 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 SCYL1Q96KG9 808 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 FOXP3Q9BZS1 431 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZKSCAN5Q9Y2L8 839 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCDC66A2RUB6 948 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 RFPL1O75677 317 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 PRKD3O94806 890 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 IL2P60568 153 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 KRT85P78386 507 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 LSAMPQ13449 338 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 HLTFQ14527 1009 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 PASD1Q8IV76 773 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 CBARPQ8N350 705 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 DBNDD2Q9BQY9 259 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 CCDC8Q9H0W5 538 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 IPPKQ9H8X2 491 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 TCF7L1Q9HCS4 588 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 DUSP13Q9UII6 198 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 PLAGL2Q9UPG8 496 aa7.3□□□□□ -1.24
HMGB1P47-201ENST00000511281 H7BY64 318 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 MYO1BO43795 1136 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 ABLIM3O94929 683 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 TBC1D8O95759 1140 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 CEBPAP49715 358 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 TEKQ02763 1124 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 NFIAQ12857 509 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 RGL3Q3MIN7 710 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 ATP13A4Q4VNC1 1196 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 HABP4Q5JVS0 413 aaKnown RBP7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 TCEAL8Q8IYN2 117 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 HSPA12BQ96MM6 686 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 YIPF4Q9BSR8 244 aa7.29□□□□□ -1.24
HMGB1P47-201ENST00000511281 ZIM2Q9NZV7 527 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms