RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 C22orf34Q6ZV56 151 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 ARMCX6Q7L4S7 300 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 JMYQ8N9B5 988 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 STK35Q8TDR2 534 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 HSPA12BQ96MM6 686 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 THUMPD2Q9BTF0 503 aaKnown RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 ATP13A1Q9HD20 1204 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 ZNF277Q9NRM2 450 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 TPX2Q9ULW0 747 aaKnown RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 CSADQ9Y600 493 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 CEMIPQ8WUJ3 1361 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 LRIG2O94898 1065 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 INHBBP09529 407 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 HSPA1AP0DMV8 641 aaKnown RBP7.6□□□□□ -1.19
GPNMB-208ENST00000470994 HSPA1BP0DMV9 641 aaKnown RBP7.6□□□□□ -1.19
GPNMB-208ENST00000470994 GPTP24298 496 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 ALDH1B1P30837 517 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 BUD31P41223 144 aaPredicted RBP7.6□□□□□ -1.19
GPNMB-208ENST00000470994 CTSWP56202 376 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 SFRP5Q5T4F7 317 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 ZBTB37Q5TC79 503 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 KIF6Q6ZMV9 814 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 SYNE4Q8N205 404 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 PNISRQ8TF01 805 aaKnown RBP7.6□□□□□ -1.19
GPNMB-208ENST00000470994 ALKBH8Q96BT7 664 aaKnown RBP7.6□□□□□ -1.19
GPNMB-208ENST00000470994 CD320Q9NPF0 282 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 SEMA3GQ9NS98 782 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 MRC1P22897 1456 aa7.6□□□□□ -1.19
GPNMB-208ENST00000470994 MAPK8IP3Q9UPT6 1336 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 IQCA1LA6NCM1 817 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 MED14OSP0DP75 135 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 EIF2S2P20042 333 aaKnown RBP7.59□□□□□ -1.19
GPNMB-208ENST00000470994 NTF4P34130 210 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 SERPINB4P48594 390 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 CDKAL1Q5VV42 579 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
GPNMB-208ENST00000470994 ATG14Q6ZNE5 492 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 TTLL7Q6ZT98 887 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 THAP5Q7Z6K1 395 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 ZNF507Q8TCN5 953 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 JDP2Q8WYK2 163 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 RPGRQ92834 1020 aaKnown RBP7.59□□□□□ -1.19
GPNMB-208ENST00000470994 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 BCO2Q9BYV7 579 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
GPNMB-208ENST00000470994 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
GPNMB-208ENST00000470994 LTBP3Q9NS15 1303 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 COL3A1P02461 1466 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-208ENST00000470994 DCDC2CA8MYV0 355 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 GLDCP23378 1020 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 EIF6P56537 245 aaKnown RBP7.58□□□□□ -1.2
GPNMB-208ENST00000470994 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
GPNMB-208ENST00000470994 NFE2L2Q16236 605 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 SCARA3Q6AZY7 606 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 ABHD4Q8TB40 342 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 CEP44Q9C0F1 390 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 NYXQ9GZU5 481 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 PNNQ9H307 717 aaKnown RBP7.58□□□□□ -1.2
GPNMB-208ENST00000470994 TAF1DQ9H5J8 278 aaPredicted RBP7.58□□□□□ -1.2
GPNMB-208ENST00000470994 HACL1Q9UJ83 578 aa7.58□□□□□ -1.2
GPNMB-208ENST00000470994 ZNF831Q5JPB2 1677 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 KLRG2A4D1S0 409 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-208ENST00000470994 ERVV-1B6SEH8 477 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 H3BS24 57 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 NUAK1O60285 661 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 EPHX2P34913 555 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 IARSP41252 1262 aaKnown RBP7.57□□□□□ -1.2
GPNMB-208ENST00000470994 RIPK4P57078 832 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 RING1Q06587 406 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 LRRC14Q15048 493 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 SUSD4Q5VX71 490 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 C12orf40Q86WS4 652 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 LDHDQ86WU2 507 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 RBM17Q96I25 401 aaKnown RBP7.57□□□□□ -1.2
GPNMB-208ENST00000470994 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 USTQ9Y2C2 406 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 COL5A3P25940 1745 aaPredicted RBP7.57□□□□□ -1.2
GPNMB-208ENST00000470994 TJP1Q07157 1748 aa7.57□□□□□ -1.2
GPNMB-208ENST00000470994 MAP3K15Q6ZN16 1313 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 ZNF541Q9H0D2 1346 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 AIMP1Q12904 312 aaKnown RBP7.56□□□□□ -1.2
GPNMB-208ENST00000470994 LLGL2Q6P1M3 1020 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 UBE3DQ7Z6J8 389 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 CCDC82Q8N4S0 544 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 COX4I2Q96KJ9 171 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 SLAMF8Q9P0V8 285 aa7.56□□□□□ -1.2
GPNMB-208ENST00000470994 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
GPNMB-208ENST00000470994 KIAA1551Q9HCM1 1747 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 KIF13BQ9NQT8 1826 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 IGHA2P01877 340 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 ANXA1P04083 346 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 GRM1Q13255 1194 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 PPP1R42Q7Z4L9 355 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 PNMA8AQ86V59 439 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-208ENST00000470994 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
GPNMB-208ENST00000470994 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms