RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 JRKLQ9Y4A0 524 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
HERC4-207ENST00000460168 ERCC3P19447 782 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 PRKG1Q13976 671 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 UBE2SQ16763 222 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 LETM2Q2VYF4 491 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 NEK8Q86SG6 692 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
HERC4-207ENST00000460168 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 LPAR1Q92633 364 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 MAF1Q9H063 256 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 CSRNP2Q9H175 543 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 KCNH3Q9ULD8 1083 aa11.68□□□□□ -0.54
HERC4-207ENST00000460168 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
HERC4-207ENST00000460168 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 CCNT1O60563 726 aaKnown RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 FOXD4Q12950 439 aaPredicted RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 MTMR2Q13614 643 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 RBM43Q6ZSC3 357 aaKnown RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 FAM160B2Q86V87 743 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 ACRBPQ8NEB7 543 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 KLRG1Q96E93 195 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 L3MBTL3Q96JM7 780 aaPredicted RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 AS3MTQ9HBK9 375 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
HERC4-207ENST00000460168 FAM163BP0C2L3 166 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 KRT26Q7Z3Y9 468 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 FBXO28Q9NVF7 368 aa11.67□□□□□ -0.54
HERC4-207ENST00000460168 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 FAM237AA0A1B0GTK4 181 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 GOLGA6L6A8MZA4 724 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 ADM5C9JUS6 153 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 SKILP12757 684 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 PTPRAP18433 802 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 EPHX2P34913 555 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP14P54578 494 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 TRAF1Q13077 416 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 SPP2Q13103 211 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 ARL6IP4Q66PJ3 421 aaKnown RBP11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP17L6PQ6QN14 398 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 USP50Q70EL3 339 aaPredicted RBP11.66□□□□□ -0.54
HERC4-207ENST00000460168 CXorf38Q8TB03 319 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 FUCA2Q9BTY2 467 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 TMX1Q9H3N1 280 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 ZHX2Q9Y6X8 837 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 LAD1O00515 517 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 PLA2G6O60733 806 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 CLK2P49760 499 aaKnown RBP11.66□□□□□ -0.54
HERC4-207ENST00000460168 TYRO3Q06418 890 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 DGKZQ13574 1117 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 CCDC174Q6PII3 467 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 KRBA2Q6ZNG9 492 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 PDILTQ8N807 584 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 ZNF280CQ8ND82 737 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
HERC4-207ENST00000460168 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
HERC4-207ENST00000460168 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
HERC4-207ENST00000460168 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.54
HERC4-207ENST00000460168 NEMFO60524 1076 aa11.65□□□□□ -0.54
HERC4-207ENST00000460168 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
HERC4-207ENST00000460168 DLK2Q6UY11 383 aa11.65□□□□□ -0.54
HERC4-207ENST00000460168 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
HERC4-207ENST00000460168 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
HERC4-207ENST00000460168 EPSTI1Q96J88 318 aa11.65□□□□□ -0.54
HERC4-207ENST00000460168 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
HERC4-207ENST00000460168 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 TAL1P17542 331 aaPredicted RBP11.64□□□□□ -0.55
HERC4-207ENST00000460168 VCAM1P19320 739 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 BACE1P56817 501 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
HERC4-207ENST00000460168 DTHD1Q6ZMT9 781 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 PRPF38AQ8NAV1 312 aaKnown RBP11.64□□□□□ -0.55
HERC4-207ENST00000460168 SLF1Q9BQI6 1058 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 WDR18Q9BV38 432 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 FLOT1O75955 427 aa11.64□□□□□ -0.55
HERC4-207ENST00000460168 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
HERC4-207ENST00000460168 LONRF3Q496Y0 759 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms