RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 DIEXFQ68CQ4 756 aaKnown RBP4.46□□□□□ -1.69
ZNF540-207ENST00000589285 MBLAC2Q68D91 279 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 TSPYL5Q86VY4 417 aaPredicted RBP4.46□□□□□ -1.69
ZNF540-207ENST00000589285 LIN37Q96GY3 246 aaPredicted RBP4.46□□□□□ -1.69
ZNF540-207ENST00000589285 SYT3Q9BQG1 590 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 PLCD4Q9BRC7 762 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 KLHL25Q9H0H3 589 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 CHST7Q9NS84 486 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 ACTR10Q9NZ32 417 aa4.46□□□□□ -1.69
ZNF540-207ENST00000589285 CROCC2H7BZ55 1655 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 DUOX2Q9NRD8 1548 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 BLACEA4D250 179 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 KLF4O43474 513 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 TNNT2P45379 298 aaPredicted RBP4.46□□□□□ -1.7
ZNF540-207ENST00000589285 PRKCQQ04759 706 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 BMS1Q14692 1282 aaKnown RBP4.46□□□□□ -1.7
ZNF540-207ENST00000589285 WAPLQ7Z5K2 1190 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 CPNE8Q86YQ8 564 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 VWDEQ8N2E2 1590 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 IGF2BP3O00425 579 aaKnown RBP eCLIP4.46□□□□□ -1.7
ZNF540-207ENST00000589285 CYP4F3Q08477 520 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 FAM178BQ8IXR5 827 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 BTN2A2Q8WVV5 523 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 FCRL3Q96P31 734 aaPredicted RBP4.46□□□□□ -1.7
ZNF540-207ENST00000589285 BCAS3Q9H6U6 928 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 GPATCH2Q9NW75 528 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 BTG4Q9NY30 223 aa4.46□□□□□ -1.7
ZNF540-207ENST00000589285 ERBINQ96RT1 1412 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 ROCK2O75116 1388 aaKnown RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 ARNTLO00327 626 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 DIAPH1O60610 1272 aaKnown RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 ATP2B1P20020 1258 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 SLC7A5Q01650 507 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 TEKQ02763 1124 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 LRRFIP1Q32MZ4 808 aaKnown RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 HEATR6Q6AI08 1181 aaKnown RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 VPS37DQ86XT2 251 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 C7orf61Q8IZ16 206 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 FBXL18Q96ME1 805 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 CGGBP1Q9UFW8 167 aaPredicted RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 PRKAG3Q9UGI9 489 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 SHANK2Q9UPX8 1470 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 ADGRL2O95490 1459 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 CYP7A1P22680 504 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 SV2CQ496J9 727 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 ZNF746Q6NUN9 644 aaPredicted RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 RBBP8NLQ8NC74 664 aaPredicted RBP4.45□□□□□ -1.7
ZNF540-207ENST00000589285 POGKQ9P215 609 aa4.45□□□□□ -1.7
ZNF540-207ENST00000589285 NLRP1Q9C000 1473 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 NOTOA8MTQ0 251 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 GSTM1P09488 218 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ZGLP1P0C6A0 271 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 RTP2Q5QGT7 225 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ANGEL2Q5VTE6 544 aaKnown RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 INTS5Q6P9B9 1019 aaKnown RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ZNF513Q8N8E2 541 aaPredicted RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ASB11Q8WXH4 323 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ALPK1Q96QP1 1244 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ADGRE2Q9UHX3 823 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 NOS1P29475 1434 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ARHGAP31Q2M1Z3 1444 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 NEURL4Q96JN8 1562 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 CEP170BQ9Y4F5 1589 aaPredicted RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ABCC3O15438 1527 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 SIGLEC6O43699 453 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 CEP152O94986 1710 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 ITGAVP06756 1048 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 MSL3P1P0C860 447 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 CLCN7P51798 805 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 INTS3Q68E01 1043 aaKnown RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 TMEM52Q8NDY8 209 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 PI4K2BQ8TCG2 481 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 PIF1Q9H611 641 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 TMEFF2Q9UIK5 374 aaPredicted RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 FBXL7Q9UJT9 491 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 SLIT1O75093 1534 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 PRDM15P57071 1507 aaPredicted RBP4.44□□□□□ -1.7
ZNF540-207ENST00000589285 DIP2AQ14689 1571 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 NCOA3Q9Y6Q9 1424 aa4.44□□□□□ -1.7
ZNF540-207ENST00000589285 IMPDH2P12268 514 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 FUT4P22083 530 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 DDR2Q16832 855 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 FOXB2Q5VYV0 432 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 DENND5AQ6IQ26 1287 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 GMLQ99445 158 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 DISP3Q9P2K9 1392 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 A2ML1A8K2U0 1454 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 TAL1P17542 331 aaPredicted RBP4.43□□□□□ -1.7
ZNF540-207ENST00000589285 SLC10A6Q3KNW5 377 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 HHIPL1Q96JK4 782 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 ASPNQ9BXN1 380 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 TRIM55Q9BYV6 548 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 ERVK13-1Q9NX77 482 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.43□□□□□ -1.7
ZNF540-207ENST00000589285 KCNH3Q9ULD8 1083 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 GCC2Q8IWJ2 1684 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 CAMSAP1Q5T5Y3 1602 aa4.43□□□□□ -1.7
ZNF540-207ENST00000589285 STK10O94804 968 aaKnown RBP4.43□□□□□ -1.7
ZNF540-207ENST00000589285 PAPLNO95428 1278 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms