RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 SLC10A3P09131 477 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 ZNF157P51786 506 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 GHRHRQ02643 423 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 CCL15Q16663 113 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 TKFCQ3LXA3 575 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 FOXD4L6Q3SYB3 417 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 FOXD4L3Q6VB84 417 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 MCF2L2Q86YR7 1114 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 TEX13BQ9BXU2 312 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 ASCC2Q9H1I8 757 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 POLR3EQ9NVU0 708 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 MAP3K20Q9NYL2 800 aaKnown RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 RTEL1Q9NZ71 1219 aa12.18□□□□□ -0.46
LEMD3-202ENST00000539442 ZNF214Q9UL59 606 aaPredicted RBP12.18□□□□□ -0.46
LEMD3-202ENST00000539442 RLFQ13129 1914 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 ELP1O95163 1332 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 MANSC4A6NHS7 340 aaPredicted RBP12.17□□□□□ -0.46
LEMD3-202ENST00000539442 MEIS2O14770 477 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 OPLAHO14841 1288 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 YEATS4O95619 227 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
LEMD3-202ENST00000539442 HERVK_113P62684 666 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 NFKBIBQ15653 356 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 CCDC102AQ96A19 550 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 AGBL1Q96MI9 1066 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 USP28Q96RU2 1077 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 OCEL1Q9H607 264 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
LEMD3-202ENST00000539442 CNPY2Q9Y2B0 182 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 A0A0G2JMZ2 1700 aa12.17□□□□□ -0.46
LEMD3-202ENST00000539442 BTBD19C9JJ37 291 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 FIBPO43427 364 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 BMP15O95972 392 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 ALAS1P13196 640 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 COPB2P35606 906 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 TMEM132BQ14DG7 1078 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 EARS2Q5JPH6 523 aaKnown RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 JAKMIP3Q5VZ66 844 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 TFIP11Q9UBB9 837 aaKnown RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 BIN2Q9UBW5 565 aaPredicted RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 RCOR1Q9UKL0 485 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 ABT1Q9ULW3 272 aaKnown RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 CEP131Q9UPN4 1083 aa12.16□□□□□ -0.46
LEMD3-202ENST00000539442 MORC2Q9Y6X9 1032 aaPredicted RBP12.16□□□□□ -0.46
LEMD3-202ENST00000539442 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 PDHXO00330 501 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 ADAMTS3O15072 1205 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 POLR2MP0CAP2 368 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 STAT3P40763 770 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 HSD17B4P51659 736 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 INHBEP58166 350 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 UBE2SQ16763 222 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 USP17L6PQ6QN14 398 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 NEK8Q86SG6 692 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 CHST13Q8NET6 341 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 LEO1Q8WVC0 666 aaPredicted RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 PARK7Q99497 189 aaKnown RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 EHMT1Q9H9B1 1298 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.15□□□□□ -0.46
LEMD3-202ENST00000539442 RNF146Q9NTX7 359 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 TMEM260Q9NX78 707 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 FBXO40Q9UH90 709 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
LEMD3-202ENST00000539442 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
LEMD3-202ENST00000539442 CFBP00751 764 aa12.14□□□□□ -0.47
LEMD3-202ENST00000539442 TAL1P17542 331 aaPredicted RBP12.14□□□□□ -0.47
LEMD3-202ENST00000539442 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
LEMD3-202ENST00000539442 SREBF2Q12772 1141 aa12.14□□□□□ -0.47
LEMD3-202ENST00000539442 SLC39A14Q15043 492 aa12.14□□□□□ -0.47
LEMD3-202ENST00000539442 STK38Q15208 465 aa12.14□□□□□ -0.47
LEMD3-202ENST00000539442 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
LEMD3-202ENST00000539442 INF2Q27J81 1249 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms