RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 GJA5P36382 358 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 RASAL3Q86YV0 1011 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 DNAJC5GQ8N7S2 189 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 TBCKQ8TEA7 893 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 RAVER2Q9HCJ3 691 aaKnown RBP16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
PDZRN3-210ENST00000492909 RBBP6Q7Z6E9 1792 aaKnown RBP16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 WNT7AO00755 349 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 AOC2O75106 756 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 OAZ1P54368 228 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 ZNF174Q15697 407 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 ADALQ6DHV7 355 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 WNK4Q96J92 1243 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 HHIPL1Q96JK4 782 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 AGTPBP1Q9UPW5 1226 aa16.04■□□□□ 0.16
PDZRN3-210ENST00000492909 MCM7P33993 719 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 CLCN1P35523 988 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 CFBP00751 764 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 FOSP01100 380 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 SLC10A3P09131 477 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 ALAS1P13196 640 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 PABPC4Q13310 644 aaKnown RBP eCLIP16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 MOGSQ13724 837 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
PDZRN3-210ENST00000492909 A0A0G2JMZ2 1700 aa16.02■□□□□ 0.16
PDZRN3-210ENST00000492909 A0A1W2PQ27 194 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 A0A1W2PQ64 194 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 A0A1W2PQD8 194 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 GCOM1H8Y6P7 765 aaPredicted RBP16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 ATP2A1O14983 1001 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 POLR2MP0CAP2 368 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 HOXA13P31271 388 aaPredicted RBP16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 GTF2A2P52657 109 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 PTGDRQ13258 359 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 LETM2Q2VYF4 491 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 ZNF214Q9UL59 606 aaPredicted RBP16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 PCNTO95613 3336 aa16.02■□□□□ 0.15
PDZRN3-210ENST00000492909 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 CUTAO60888 179 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 ZBTB48P10074 688 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 CETPP11597 493 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 AXDND1Q5T1B0 1012 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 SNRNP48Q6IEG0 339 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 MCF2L2Q86YR7 1114 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 TEX13BQ9BXU2 312 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 ASCC2Q9H1I8 757 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 HOMER2Q9NSB8 354 aa16.01■□□□□ 0.15
PDZRN3-210ENST00000492909 PTPREP23469 700 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 TMEM132BQ14DG7 1078 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 TBC1D5Q92609 795 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 FBXO2Q9UK22 296 aaPredicted RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 NFIBO00712 420 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 OSBPP22059 807 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 PLS1Q14651 629 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 GPAT2Q6NUI2 795 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 LBX2Q6XYB7 198 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 SAMD3Q8N6K7 520 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 MRPS27Q92552 414 aaKnown RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 FERMT2Q96AC1 680 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 TRIM44Q96DX7 344 aaPredicted RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 TRERF1Q96PN7 1200 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 MAP3K20Q9NYL2 800 aaKnown RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 SRPRBQ9Y5M8 271 aaKnown RBP16■□□□□ 0.15
PDZRN3-210ENST00000492909 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
PDZRN3-210ENST00000492909 LAD1O00515 517 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 LIG1P18858 919 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 STAT3P40763 770 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 HSD17B4P51659 736 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 USP11P51784 963 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 HERVK_113P62684 666 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 GHRHRQ02643 423 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 CCDC73Q6ZRK6 1079 aa15.99■□□□□ 0.15
PDZRN3-210ENST00000492909 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms