RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TAF6LQ9Y6J9 622 aa9.15□□□□□ -0.94
PTPN3-201ENST00000262539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-201ENST00000262539 BIRC2Q13490 618 aa9.15□□□□□ -0.94
PTPN3-201ENST00000262539 SPA17Q15506 151 aa9.15□□□□□ -0.94
PTPN3-201ENST00000262539 CLIC4Q9Y696 253 aa9.15□□□□□ -0.94
PTPN3-201ENST00000262539 ATRNL1Q5VV63 1379 aa9.15□□□□□ -0.94
PTPN3-201ENST00000262539 STRCP1A6NGW2 1772 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 SNAP23O00161 211 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 SNHG28P0DPA3 235 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 NOVP48745 357 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 ZNF658Q5TYW1 1059 aaPredicted RBP9.15□□□□□ -0.95
PTPN3-201ENST00000262539 PANK2Q9BZ23 570 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 THAP9Q9H5L6 903 aa9.15□□□□□ -0.95
PTPN3-201ENST00000262539 CWC15Q9P013 229 aaKnown RBP9.15□□□□□ -0.95
PTPN3-201ENST00000262539 A0A1W2PQC6 194 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 SYDE2Q5VT97 1194 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 LUZP1Q86V48 1076 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 POLLQ9UGP5 575 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FOXP2O15409 715 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 NT5DC1Q5TFE4 455 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CEP95Q96GE4 821 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 ANO3Q9BYT9 981 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 TMOD4Q9NZQ9 345 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 PCDHA12Q9UN75 941 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 PAPPAQ13219 1627 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 DNA2P51530 1060 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CLUL1Q15846 466 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FAM26FQ5R3K3 315 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 KLHL10Q6JEL2 608 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CDC42EP5Q6NZY7 148 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 LEKR1Q6ZMV7 388 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 TMC6Q7Z403 805 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 ZNF341Q9BYN7 854 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 SAP30BPQ9UHR5 308 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 DYDC1Q8WWB3 177 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 LARP4BQ92615 738 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 UBR2Q8IWV8 1755 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 N4BP1O75113 896 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 PHACTR2O75167 634 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 KIAA0754O94854 1291 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FERP16591 822 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 SNRPFP62306 86 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 FUT2Q10981 343 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 MORC3Q14149 939 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 IQCB1Q15051 598 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC174Q6PII3 467 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 INF2Q27J81 1249 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CCDC40Q4G0X9 1142 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 SPOUT1Q5T280 376 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 TCERG1LQ5VWI1 586 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 CALR3Q96L12 384 aaKnown RBP9.14□□□□□ -0.95
PTPN3-201ENST00000262539 RIT2Q99578 217 aa9.14□□□□□ -0.95
PTPN3-201ENST00000262539 LOC102724159A0A0B4J2E5 919 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 FKBP3Q00688 224 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 MYBPC2Q14324 1141 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 PWP2Q15269 919 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 GPR162Q16538 588 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 DDX23Q9BUQ8 820 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 VCPKMTQ9H867 229 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 INCENPQ9NQS7 918 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 UNC13DQ70J99 1090 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 SYMPKQ92797 1274 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 UNCXA6NJT0 531 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 KIAA0391O15091 583 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 OAZ1P54368 228 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 SRBD1Q8N5C6 995 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 HAUS4Q9H6D7 363 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 PPME1Q9Y570 386 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 F5H6K3 240 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 KRT86O43790 486 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 KLRC3Q07444 240 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 PIGSQ96S52 555 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 TMEM232C9JQI7 657 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 PLEKHA8P1O95397 391 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 CCT6AP40227 531 aaKnown RBP9.13□□□□□ -0.95
PTPN3-201ENST00000262539 STAT2P52630 851 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 NR5A1Q13285 461 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 NIPA1Q7RTP0 329 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 NBPF11Q86T75 865 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 TXNRD3Q86VQ6 643 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 MB21D1Q8N884 522 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 CSRNP2Q9H175 543 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 IFNKQ9P0W0 207 aa9.13□□□□□ -0.95
PTPN3-201ENST00000262539 BIN1O00499 593 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 STAM2O75886 525 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 PDHBP11177 359 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 MAP2K1Q02750 393 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-201ENST00000262539 FAM182BQ5T319 152 aa9.12□□□□□ -0.95
PTPN3-201ENST00000262539 MYOCDQ8IZQ8 938 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms