RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 STX18Q9P2W9 335 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 ANGEL1Q9UNK9 670 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 HNRNPCP07910 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 PLEKHM3Q6ZWE6 761 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 SMCR8Q8TEV9 937 aaPredicted RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 MKL2Q9ULH7 1088 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 ZBED4O75132 1171 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 PDHA1P08559 390 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 HSPD1P10809 573 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 GRIN1Q05586 938 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 TCP10Q12799 353 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 CABP7Q86V35 215 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 BBS5Q8N3I7 341 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 CCNYQ8ND76 341 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 G3BP2Q9UN86 482 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 MCF2LO15068 1137 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 SPOPLQ6IQ16 392 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 RUNDC3BQ96NL0 473 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 EYA3Q99504 573 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 ADPGKQ9BRR6 497 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 BICC1Q9H694 974 aaKnown RBP15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 MORC3Q14149 939 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 PPM1KQ8N3J5 372 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 FLCNQ8NFG4 579 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 DNAJC6O75061 913 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 RSRC2Q7L4I2 434 aaKnown RBP15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 CATSPER3Q86XQ3 398 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 MTRQ99707 1265 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 PANK4Q9NVE7 773 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 EHBP1L1Q8N3D4 1523 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 TESPA1A2RU30 521 aaPredicted RBP15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 CHEK2O96017 543 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 PTPREP23469 700 aa15.85■□□□□ 0.13
SPTLC2-201ENST00000216484 CYP4F22Q6NT55 531 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 TTC30AQ86WT1 665 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 PCDHB4Q9Y5E5 795 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 K7ENM7 598 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 ZNF711Q9Y462 761 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 POGZQ7Z3K3 1410 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 PRKG1Q13976 671 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 ARHGEF18Q6ZSZ5 1173 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 EXT2Q93063 718 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 TFCP2L1Q9NZI6 479 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 RRP15Q9Y3B9 282 aaKnown RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 VCAM1P19320 739 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 GPBP1Q86WP2 473 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 MAGOHBQ96A72 148 aaKnown RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 NUDCD1Q96RS6 583 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 ESRRAP11474 423 aaPredicted RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 IQCDQ96DY2 449 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 KLC2Q9H0B6 622 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 ATP8A1Q9Y2Q0 1164 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 SNX5Q9Y5X3 404 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 SBNO1A3KN83 1393 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 ESRRBO95718 433 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 TCP11X2Q5H9J9 407 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 L3MBTL1Q9Y468 752 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 TADA3O75528 432 aa15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 VCPP55072 806 aaKnown RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 RBM46Q8TBY0 533 aaKnown RBP15.84■□□□□ 0.13
SPTLC2-201ENST00000216484 PATL1Q86TB9 770 aaKnown RBP15.83■□□□□ 0.13
SPTLC2-201ENST00000216484 OR8K1Q8NGG5 319 aa15.83■□□□□ 0.13
SPTLC2-201ENST00000216484 ZC3H15Q8WU90 426 aaKnown RBP15.83■□□□□ 0.13
SPTLC2-201ENST00000216484 TUBB6Q9BUF5 446 aa15.83■□□□□ 0.13
SPTLC2-201ENST00000216484 KPNA2P52292 529 aaKnown RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 KHDRBS2Q5VWX1 349 aaKnown RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 KCTD6Q8NC69 237 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 PHF21AQ96BD5 680 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 MMTAG2Q9BU76 263 aaKnown RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC38A10Q9HBR0 1119 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 CPA1P15085 419 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 GUCY2CP25092 1073 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 MESDQ14696 234 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 KRT27Q7Z3Y8 459 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 EFCAB8A8MWE9 144 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 E2F4Q16254 413 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 TMEM87BQ96K49 555 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 KCNG1Q9UIX4 513 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 CTNND1O60716 968 aaKnown RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC9A1P19634 815 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 SLC39A6Q13433 755 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 GANCQ8TET4 914 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 DENND2AQ9ULE3 1009 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 DYNLT1P63172 113 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 ZBTB8OSQ8IWT0 167 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 ASZ1Q8WWH4 475 aa15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 RBM17Q96I25 401 aaKnown RBP15.83■□□□□ 0.12
SPTLC2-201ENST00000216484 CREB3O43889 395 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 PTK2BQ14289 1009 aa15.82■□□□□ 0.12
SPTLC2-201ENST00000216484 USP26Q9BXU7 913 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms