RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 HMG20BQ9P0W2 317 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SCHIP1Q9P0W5 487 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 CFDP1Q9UEE9 299 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 SLC12A6Q9UHW9 1150 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 PUF60Q9UHX1 559 aaKnown RBP6.78□□□□□ -1.32
SNHG1-211ENST00000539921 LRCH1Q9Y2L9 728 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 TMEM94Q12767 1356 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
SNHG1-211ENST00000539921 NEDD4P46934 1319 aa6.77□□□□□ -1.32
SNHG1-211ENST00000539921 AFF2P51816 1311 aa6.77□□□□□ -1.32
SNHG1-211ENST00000539921 A0A1B0GVL5 298 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 AKR1B15C9JRZ8 316 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 G3V3G9 751 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 LSM1O15116 133 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 DIAPH2O60879 1101 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MTRF1O75570 445 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 TRIM37O94972 964 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PARNO95453 639 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SERPINC1P01008 464 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MSL3P1P0C860 447 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 ZKSCAN1P17029 563 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 S100A1P23297 94 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 STAT6P42226 847 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SCNN1BP51168 640 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 VAV2P52735 878 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PAK2Q13177 524 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 ITGB3BPQ13352 177 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 LSAMPQ13449 338 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 KPNB1Q14974 876 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PPP1R7Q15435 360 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 CFAP100Q494V2 611 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC152Q4G0S7 254 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 TTMPQ5BVD1 217 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 CFAP157Q5JU67 520 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 AKNAD1Q5T1N1 836 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 OR52E8Q6IFG1 317 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 ANO7Q6IWH7 933 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 RUFY4Q6ZNE9 571 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 Q6ZUG5 572 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 TOGARAM2Q6ZUX3 1019 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PASD1Q8IV76 773 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MICALL2Q8IY33 904 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.77□□□□□ -1.333e-7■■■■■ 36.2
SNHG1-211ENST00000539921 PDCD7Q8N8D1 485 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 ENDOVQ8N8Q3 282 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SYT2Q8N9I0 419 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 TRIML1Q8N9V2 468 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 NOA1Q8NC60 698 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC197Q8NCU1 140 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 FBF1Q8TES7 1133 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 RRP36Q96EU6 259 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 RBM33Q96EV2 1170 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 SNX27Q96L92 541 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 AGBL1Q96MI9 1066 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 NR1H4Q96RI1 486 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MTRQ99707 1265 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.77□□□□□ -1.331e-17■■■□□ 16.6
SNHG1-211ENST00000539921 KRT23Q9C075 422 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 HSD3B7Q9H2F3 369 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MRPL46Q9H2W6 279 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC134Q9H6E4 229 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MRPL44Q9H9J2 332 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PREBQ9HCU5 417 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 RNF14Q9UBS8 474 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 RRP7AQ9Y3A4 280 aaKnown RBP6.77□□□□□ -1.33
SNHG1-211ENST00000539921 ATP6V0A2Q9Y487 856 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 PXDNLA1KZ92 1463 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 VWDEQ8N2E2 1590 aa6.77□□□□□ -1.33
SNHG1-211ENST00000539921 MAP3K4Q9Y6R4 1608 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 HIP1O00291 1037 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 O00370 1275 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 P4HA2O15460 535 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 HIP1RO75146 1068 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ZMYND10O75800 440 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 KIF4AO95239 1232 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ALDH2P05091 517 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 NQO1P15559 274 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ALOX15P16050 662 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 PORP16435 677 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ZNF18P17022 549 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 POLR2EP19388 210 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ADD1P35611 737 aaKnown RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ATP8B2P98198 1209 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 GSTM4Q03013 218 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 FAM69CQ0P6D2 419 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ST3GAL1Q11201 340 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ITGA9Q13797 1035 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 SEPT6Q14141 434 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 KRT32Q14532 448 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 INF2Q27J81 1249 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 PARP6Q2NL67 630 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 DPCR1Q3MIW9 517 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC14Q49A88 953 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 ZNF394Q53GI3 561 aa6.76□□□□□ -1.33
SNHG1-211ENST00000539921 PARP10Q53GL7 1025 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms