RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
CSDE1-211ENST00000525970 FILIP1Q7Z7B0 1213 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 NLRX1Q86UT6 975 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 DAGLBQ8NCG7 672 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 ZCRB1Q8TBF4 217 aaKnown RBP6.5□□□□□ -1.37
CSDE1-211ENST00000525970 APPBP2Q92624 585 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 MKRN2Q9H000 416 aaKnown RBP6.5□□□□□ -1.37
CSDE1-211ENST00000525970 PCDH12Q9NPG4 1184 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 CRTAC1Q9NQ79 661 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 KCTD3Q9Y597 815 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
CSDE1-211ENST00000525970 A0A1W2PQH9 124 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 DNAJC6O75061 913 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 GJB6O95452 261 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 KIR2DL1P43626 348 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-211ENST00000525970 KIR2DL2P43627 348 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-211ENST00000525970 PPP2R5EQ16537 467 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 C2orf27AQ580R0 203 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 UNC5AQ6ZN44 842 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 HOMER1Q86YM7 354 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 TAB3Q8N5C8 712 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-211ENST00000525970 RELTQ969Z4 430 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 HDAC8Q9BY41 377 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 ZCCHC4Q9H5U6 513 aa6.49□□□□□ -1.37
CSDE1-211ENST00000525970 NOTOA8MTQ0 251 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 NRDCO43847 1150 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 BMP7P18075 431 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 IFRD2Q12894 506 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 ZYXQ15942 572 aaKnown RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 CCDC144CPQ8IYA2 1237 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 RPUSD2Q8IZ73 545 aaKnown RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 ZNF655Q8N720 491 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 ZNF669Q96BR6 464 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 MAP6Q96JE9 813 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 KCNC2Q96PR1 638 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 SPC25Q9HBM1 224 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 SUCOQ9UBS9 1254 aaKnown RBP6.48□□□□□ -1.37
CSDE1-211ENST00000525970 FBXL21Q9UKT6 434 aa6.48□□□□□ -1.37
CSDE1-211ENST00000525970 TP53P04637 393 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 IBSPP21815 317 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 RPL10P27635 214 aaKnown RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 SLC14A2Q15849 920 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 TDRD10Q5VZ19 366 aaKnown RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 MRM1Q6IN84 353 aaKnown RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 C16orf86Q6ZW13 317 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-211ENST00000525970 SIGLEC10Q96LC7 697 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 SGPP1Q9BX95 441 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 ZMYM5Q9UJ78 669 aa6.47□□□□□ -1.37
CSDE1-211ENST00000525970 C9IYK1 514 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 GYS2P54840 703 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 AMPD3Q01432 767 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 SNW1Q13573 536 aaKnown RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 ADGRF1Q5T601 910 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 LARP1BQ659C4 914 aaKnown RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 OLFML2BQ68BL8 750 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 WAPLQ7Z5K2 1190 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 TMC3Q7Z5M5 1100 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 MARCH10Q8NA82 808 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 LINC00116Q8NCU8 138 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 PRDM14Q9GZV8 571 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 MBD1Q9UIS9 605 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-211ENST00000525970 PCDHB12Q9Y5F1 795 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 SLC12A7Q9Y666 1083 aa6.46□□□□□ -1.38
CSDE1-211ENST00000525970 SSU72P8A0A1W2PR75 194 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 B2RBV5 119 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 ABLIM1O14639 778 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 USP2O75604 605 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-211ENST00000525970 PNLIPP16233 465 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 PMS1P54277 932 aaKnown RBP6.45□□□□□ -1.38
CSDE1-211ENST00000525970 ANAPC15P60006 121 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 SRSF3P84103 164 aaKnown RBP6.45□□□□□ -1.38
CSDE1-211ENST00000525970 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
CSDE1-211ENST00000525970 SSPNQ14714 243 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 TKFCQ3LXA3 575 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 BBS9Q3SYG4 887 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 MTERF2Q49AM1 385 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 C6orf15Q6UXA7 325 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-211ENST00000525970 SPATC1Q76KD6 591 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 FAM178BQ8IXR5 827 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 FEZ1Q99689 392 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 FOXP3Q9BZS1 431 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 SIRT5Q9NXA8 310 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 TCFL5Q9UL49 500 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 IRAK3Q9Y616 596 aa6.45□□□□□ -1.38
CSDE1-211ENST00000525970 PPP1R12AO14974 1030 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-211ENST00000525970 MARCH6O60337 910 aa6.44□□□□□ -1.38
CSDE1-211ENST00000525970 VIL1P09327 827 aaKnown RBP6.44□□□□□ -1.38
CSDE1-211ENST00000525970 ENDOUP21128 410 aaKnown RBP6.44□□□□□ -1.38
CSDE1-211ENST00000525970 GALK1P51570 392 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms