RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 KCNN1Q92952 543 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 BRF1Q92994 677 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 ZNF669Q96BR6 464 aaPredicted RBP5.69□□□□□ -1.5
CBX3-207ENST00000481300 DNAJC7Q99615 494 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 NOL6Q9H6R4 1146 aaKnown RBP5.69□□□□□ -1.5
CBX3-207ENST00000481300 CHST7Q9NS84 486 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 PFDN2Q9UHV9 154 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 GPR160Q9UJ42 338 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 FHOD1Q9Y613 1164 aa5.69□□□□□ -1.5
CBX3-207ENST00000481300 A0A087WZG4 1122 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 MEIS1O00470 390 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 PRAMEF1O95521 474 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 LINC00310P59036 64 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 ZNF445P59923 1031 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 PPP2R5DQ14738 602 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 RNF111Q6ZNA4 994 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 ZNF605Q86T29 641 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 AMIGO3Q86WK7 504 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 SPPL2CQ8IUH8 684 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 FIBCD1Q8N539 461 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 DAGLBQ8NCG7 672 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 SYTL4Q96C24 671 aaPredicted RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 TCTN2Q96GX1 697 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 FOXP3Q9BZS1 431 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 APEX2Q9UBZ4 518 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 SUSD2Q9UGT4 822 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 AKT3Q9Y243 479 aa5.68□□□□□ -1.5
CBX3-207ENST00000481300 DIS3Q9Y2L1 958 aaKnown RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 TMA7Q9Y2S6 64 aaKnown RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
CBX3-207ENST00000481300 TMEM82A0PJX8 343 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 PEX10O60683 326 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 USP2O75604 605 aaPredicted RBP5.67□□□□□ -1.5
CBX3-207ENST00000481300 RPL10P27635 214 aaKnown RBP5.67□□□□□ -1.5
CBX3-207ENST00000481300 SNX17Q15036 470 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 SPATC1Q76KD6 591 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 NLRX1Q86UT6 975 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 ZNF655Q8N720 491 aaPredicted RBP5.67□□□□□ -1.5
CBX3-207ENST00000481300 BVESQ8NE79 360 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 RCC1LQ96I51 464 aaKnown RBP5.67□□□□□ -1.5
CBX3-207ENST00000481300 ZDHHC15Q96MV8 337 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 ZNF552Q9H707 407 aaPredicted RBP5.67□□□□□ -1.5
CBX3-207ENST00000481300 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 KDM2BQ8NHM5 1336 aa5.67□□□□□ -1.5
CBX3-207ENST00000481300 SSU72P8A0A1W2PR75 194 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 GSNP06396 782 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 DLG4P78352 724 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 CIAPIN1Q6FI81 312 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 GIMAP6Q6P9H5 292 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 ZPBP2Q6X784 338 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 WAPLQ7Z5K2 1190 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 SGSM3Q96HU1 749 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 MAP6Q96JE9 813 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 SPATA9Q9BWV2 254 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 GCM1Q9NP62 436 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 CGGBP1Q9UFW8 167 aaPredicted RBP5.66□□□□□ -1.5
CBX3-207ENST00000481300 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
CBX3-207ENST00000481300 NUAK1O60285 661 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 SEMA7AO75326 666 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 KCNH1O95259 989 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 ITGAVP06756 1048 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 PDE6BP35913 854 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 PCBP3P57721 371 aaKnown RBP5.65□□□□□ -1.5
CBX3-207ENST00000481300 POU4F1Q01851 419 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 HSP90AA2PQ14568 343 aaPredicted RBP5.65□□□□□ -1.5
CBX3-207ENST00000481300 ZNF227Q86WZ6 799 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 SIRT2Q8IXJ6 389 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 ARHGEF39Q8N4T4 335 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 LINC00116Q8NCU8 138 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 HHIPL1Q96JK4 782 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 SGPP1Q9BX95 441 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 EMC9Q9Y3B6 208 aa5.65□□□□□ -1.5
CBX3-207ENST00000481300 TEX51A0A1B0GUA7 166 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 A0A1W2PQU0 124 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 TLDC2A0PJX2 215 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 H0Y8X5 98 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 NRDCO43847 1150 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 SMARCA5O60264 1052 aaPredicted RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 DIAPH1O60610 1272 aaKnown RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 FKTNO75072 461 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 SYPP08247 313 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 KIR2DL1P43626 348 aaPredicted RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 KIR2DL2P43627 348 aaPredicted RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 NOP2P46087 812 aaKnown RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 AMPD2Q01433 879 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 GRB10Q13322 594 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 CRTC3Q6UUV7 619 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 TTLL10Q6ZVT0 673 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 TRIM59Q8IWR1 403 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 ZNF513Q8N8E2 541 aaPredicted RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 IPO9Q96P70 1041 aaKnown RBP5.64□□□□□ -1.51
CBX3-207ENST00000481300 LGR4Q9BXB1 951 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 IRF2BPLQ9H1B7 796 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 SHROOM4Q9ULL8 1493 aa5.64□□□□□ -1.51
CBX3-207ENST00000481300 CD3EP07766 207 aa5.63□□□□□ -1.51
CBX3-207ENST00000481300 BMP8BP34820 402 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms