RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PLCG1P19174 1290 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 CDK17Q00537 523 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 CABP7Q86V35 215 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 CERS3Q8IU89 383 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 AMOTL1Q8IY63 956 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-209ENST00000470026 P2RX5Q93086 422 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 ABCB6Q9NP58 842 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 EXOC1Q9NV70 894 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 MAGEC2Q9UBF1 373 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-209ENST00000470026 JAG2Q9Y219 1238 aa15.3■□□□□ 0.04
BRCA1-209ENST00000470026 BICDL2A1A5D9 508 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 KCNQ4P56696 695 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 VSNL1P62760 191 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 ST5P78524 1137 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 GRIK5Q16478 980 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 TXNRD1Q16881 649 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 TUBGCP2Q9BSJ2 902 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 RTFDC1Q9BY42 306 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-209ENST00000470026 TRIM10Q9UDY6 481 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 A0A1W2PQJ5 194 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 KLRF2D3W0D1 207 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 LDHCP07864 332 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 KRT83P78385 493 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 ZBED6P86452 979 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 NONOQ15233 471 aaKnown RBP eCLIP15.29■□□□□ 0.04
BRCA1-209ENST00000470026 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 CCDC170Q8IYT3 715 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 TXLNBQ8N3L3 684 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 CSGALNACT2Q8N6G5 542 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
BRCA1-209ENST00000470026 SLC44A5Q8NCS7 719 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 NEDD1Q8NHV4 660 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
BRCA1-209ENST00000470026 ERGIC2Q96RQ1 377 aa15.29■□□□□ 0.04
BRCA1-209ENST00000470026 ESYT2A0FGR8 921 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 B4DLN1 442 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
BRCA1-209ENST00000470026 GRAPQ13588 217 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 MIIPQ5JXC2 388 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 RASSF8Q8NHQ8 419 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
BRCA1-209ENST00000470026 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
BRCA1-209ENST00000470026 MMTAG2Q9BU76 263 aaKnown RBP15.28■□□□□ 0.04
BRCA1-209ENST00000470026 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 ZPR1O75312 459 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 GNA11P29992 359 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 STK4Q13043 487 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 NEK8Q86SG6 692 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 CCDC47Q96A33 483 aaKnown RBP15.28■□□□□ 0.04
BRCA1-209ENST00000470026 IQCDQ96DY2 449 aa15.28■□□□□ 0.04
BRCA1-209ENST00000470026 HNRNPH3P31942 346 aaKnown RBP15.27■□□□□ 0.04
BRCA1-209ENST00000470026 CYLC1P35663 651 aaPredicted RBP15.27■□□□□ 0.04
BRCA1-209ENST00000470026 PDE4DQ08499 809 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 GPS2Q13227 327 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 TSR1Q2NL82 804 aaKnown RBP15.27■□□□□ 0.04
BRCA1-209ENST00000470026 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 CNOT6LQ96LI5 555 aaKnown RBP15.27■□□□□ 0.04
BRCA1-209ENST00000470026 PLIN2Q99541 437 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 C6orf50Q9HD87 102 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.04
BRCA1-209ENST00000470026 BTAF1O14981 1849 aa15.27■□□□□ 0.03
BRCA1-209ENST00000470026 GPR75-ASB3A0A0A6YYF3 556 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 RHOXF2BP0C7M4 288 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 CDK8P49336 464 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 USP14P54578 494 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 NAPAP54920 295 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 HNRNPH2P55795 449 aaKnown RBP15.26■□□□□ 0.03
BRCA1-209ENST00000470026 TBC1D8BQ0IIM8 1120 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 CCDC122Q5T0U0 273 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 CCDC24Q8N4L8 307 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 RPGRIP1Q96KN7 1286 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 RHOXF2Q9BQY4 288 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 PDE11AQ9HCR9 933 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 SMCO2A6NFE2 343 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 EIF3JO75822 258 aaKnown RBP15.26■□□□□ 0.03
BRCA1-209ENST00000470026 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
BRCA1-209ENST00000470026 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 AMPD3Q01432 767 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 CASP8Q14790 479 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 CENPPQ6IPU0 288 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 KIAA0895Q8NCT3 520 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 MTMR9Q96QG7 549 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 EYA3Q99504 573 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 SAR1BQ9Y6B6 198 aa15.26■□□□□ 0.03
BRCA1-209ENST00000470026 ABCB11O95342 1321 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms